Salvelinus sp. IW2-2015 (Arctic char): 111950681
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Entry
111950681 CDS
T05762
Name
(RefSeq) steroid hormone receptor ERR1 isoform X1
KO
K08552
estrogen-related receptor alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111950681
03029 Mitochondrial biogenesis [BR:
salp03029
]
111950681
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111950681
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
111950681
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
111950681
Nuclear receptors [BR:
salp03310
]
3. Estrogen like
3B. Estrogen-related receptor
111950681
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
111950681
NCBI-ProteinID:
XP_023824233
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Position
LG23:complement(37542347..37560427)
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AA seq
435 aa
AA seq
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MIMSSRERRSDLYIKAEPSSPEGGGGGRASPGGASSDSSQSGGGGNRRDGVGRYSPPLYT
PALRCHFKEEGGDGAEEGSTGSGGGRCKYALSTLPKRLCLVCGDVASGYHYGVASCEACK
AFFKRTIQGNIEYSCPASNECEITKRRRKACQACRFTKCLKVGMLKEGVRLDRVRGGRQK
YKRRPEMESATYQSAPLPLRKEGEKGSSNIIVSHLLVAEPEKLFAMPDPLQPDTAQRTLT
TLCDLADRELVVIIGWAKHIPGFLSLSLADQMSVLQSVWLEVLVLGVAFRSLGCEDEVVF
AEDFVLDEEMSRVAGLTELNAAVSQLARRFRFLQLDREEFVMLKAIALTNSDSVYIEDME
AVQKLRDLLHQTLLEMECQRRPEDPQRAGRLLFTLPLLRQTAGRALTTFYSIKTRGGVPM
HKLFLEMLEAMMDSP
NT seq
1308 nt
NT seq
+upstream
nt +downstream
nt
atgatcatgtcttccagggagcgtcggtcagacctgtacatcaaggcagagcccagcagt
ccagagggaggtggtgggggccgggccagcccagggggagcctcctcagactcctcccag
agtggtggaggtggaaatagaagagacggggttgggcgctactcaccccctctgtacacc
ccagccctgcgctgccacttcaaggaggagggtggggatggggcggaggagggatccaca
ggtagcggaggagggaggtgcaagtatgccctgagcacgctacctaagagactgtgttta
gtatgtggagacgtagcctctggctaccactacggtgtagcctcgtgtgaagcctgcaag
gcctttttcaagagaaccatccagggtaacattgaatatagctgtccggcgtcaaacgaa
tgtgagatcaccaagaggcgcagaaaggcttgccaggcgtgccgcttcaccaagtgcctc
aaagtgggcatgctgaaagagggagtccgtctggaccgagtcagaggtgggaggcagaag
tataaaagacgtccagagatggagagcgcaacctatcagagtgcccctttaccgcttagg
aaggaaggagagaaaggatcctccaacatcattgtgtcccacctcctggtggcagagcca
gagaaactgtttgccatgcctgaccccctgcagcctgatacggctcagcgcacactaacc
accctctgtgacctcgccgaccgcgaactggtcgtcatcattggctgggccaaacacatc
cccggcttcctgtcgctgtccctggcagaccagatgtcggtgctgcagtcggtgtggctg
gaggtgctggtgctgggtgtggccttccgctccctaggctgtgaggatgaggtagtgttc
gcagaggactttgtccttgatgaggagatgtctcgcgtggctggactgacagagctcaac
gcagccgtcagccagctggcccgacgcttccgcttcctgcagctggaccgggaggagttt
gtcatgctcaaagccattgcactcaccaactcagactctgtgtacatagaggacatggag
gcggtgcagaagctgagggacctcctccaccagaccctgttggagatggagtgccagcga
cgccccgaggacccccagcgggcggggcgtctcctcttcaccctccccctcctccgccag
acggctggtcgcgccctcaccaccttctatagcatcaagacccgaggcggcgtgcccatg
cacaaactcttcctagagatgctggaagccatgatggactcgccctag
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