Salvelinus sp. IW2-2015 (Arctic char): 111957236
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Entry
111957236 CDS
T05762
Name
(RefSeq) laminin subunit gamma-1
KO
K05635
laminin, gamma 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111957236
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111957236
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Gene cluster
GFIT
Motif
Pfam:
Laminin_N
Laminin_EGF
Laminin_B
F420_ligase
Death
Alanine_zipper
Motif
Other DBs
NCBI-GeneID:
111957236
NCBI-ProteinID:
XP_023833782
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Position
LG32:complement(18816933..18887541)
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AA seq
1595 aa
AA seq
DB search
MRWFIQVVFSLTCLAICSHSAMDECTDDSSRPQRCMPEFVNAAFNVTVVATNTCGSPPEE
YCVQTGVTGVTKSCHICDARDRRQHHSAVYLTDYNNQQDTTWWQSQTMLAGIQYPNSINL
TLHLGKAFDITYVRLKFHTSRPESFAIYKRTSEDGPWTPYQYYSGSCEKTYQKFNRGFIR
TGEDEQQALCTDEFSDISPLTGGNVAFSTLEGRPSAYNFDNSPVLQEWVTATDIKVTLNR
LNTFGDEVFNDPKVLKSYYYAISDFAVGGRCKCNGHASECVKNNGFDKPVCNCKHNTEGD
DCNVCKPFYNDRPWRRATANNPNECLQCNCNGKSAECYFDPELYRATGHGGHCRNCADNT
DGPNCERCLDNHYRDRSGNRCLPCSCNPVGSLATQCDNTGRCSCKPGVMGDKCDRCQPGF
HTLTEAGCRPCSCNPSGSTQECDVQTGRCQCKDNVEGFNCDRCKLGYFNMDPQNPQGCTP
CFCFQHSSVCDSAEGYSIDTVSSTFDKGDEQWTAQQRDGSSVSVQWSAGGEEISLISEDY
FPMYFVAPERFLGNQLLSYGQNLTLNFRVDRRDTRLSAEDVVLEGAGLRVAVPLIAQGNA
YPGENMQTFVFRLHDSTDYPWRPTLPQSEFQKLLHNLTSIKIRGTYSERSAGYLDDVMLI
TARSGPGTPARWVEKCTCPQGYMGQHCEMCALGYRRSRPDLGAFSSCDACNCNGHSDTCN
SDTGMCDCQHNTAGLSCERCKDGYYGDSTVGSSSDCKPCPCPGGSTCAVVPKTKEVVCTN
CPTGTTGKRCELCDDGFFGDPLGENGPVRVCRACKCSDNIDPNAVGNCDRETGECLKCIY
NTDGFFCDRCKEGFYGNPLATNSNDKCKPCSCSPYGTVDRQTSCLQVTGQCPCLAHVTNR
DCSACEPGFFNLQSGTGCERCTCNPIGSINGQCDIGSGQCECQPGVTGLRCERCEVNFFG
FGLSGCKPCDCDPEGSSTTQCKDDGRCECRPGFVGARCDMCEENYFYNRSTLGCQQCPSC
YSLVRDKVNQQRQKLHDLQNLIDNLGSTSEAVSDKAFEDRLKQAEKAIMDLLEEAQTSKD
VDKGLLERLGNLNNTLTTQWNRLQNIRNSVDDXGTQTDKARNRVRDAEDLVDRAREELDK
AKDAISKLDIKTPSNTADPNNMTLLAEEARNLADKHKMDADQIEKIAKDANNTSTKAXNL
LMKTLDGEGKTNKDIDELNRKYNEAKDLAKNLEKQANKVHAEAEEAGDKALKIYANLTSL
PPFNTKSLEDEASKIKKEASDLDKLIDKTEKEYNDLRDDLRGKETEVRKLLEKGKTEQQT
ADQLLARADAAKALAEEAASKGRSTYQEAQDILGNLRDFDKRVNDNKTAAENAMKRIPEI
NATIAAANEKTKQAEGALGNADADAKEAKSKAEEAEKIASVVQKGSAKTKADAEKAFEDT
RKLDGEVNNMMDQLSAAEAELAKKKAEADQDMMMASMASDNAKEAEDNSRKAKSAVRTVL
NTINDLLKSLGNIDKVDLSKLGLIEGSLKQAKDKMANSDLDRKLAELNDVAKSQDEMITD
YDRQIKEIQSDIANLNDIKNTLPNGCFNTPSIERA
NT seq
4788 nt
NT seq
+upstream
nt +downstream
nt
atgcgttggtttattcaagttgtgttttcattgacttgtttggctatatgtagccacagt
gctatggatgaatgcactgatgattcgagtcggcctcagcgatgcatgccagagtttgtc
aacgctgctttcaatgtcactgtggtagctaccaatacttgtggctctcccccagaagaa
tactgtgtacaaaccggggttacgggggtcaccaagtcgtgccacatttgcgatgccagg
gatcgtagacaacatcacagtgctgtgtacctcaccgattacaacaatcaacaggacacc
acctggtggcaaagtcagactatgttagcgggcatccagtatccaaactcaatcaatcta
actcttcatcttggcaaggcttttgacatcacttacgtgcgactcaagttccacaccagc
cgcccagagagcttcgccatctacaagcgcacaagtgaggatggaccatggacgccctac
cagtactacagtggctcctgtgagaagacctaccagaagttcaacaggggcttcatccgc
accggagaggacgaacagcaggccctctgcaccgacgagttcagtgacatctcacccttg
accggaggaaacgtggcgttctccacccttgagggccgacccagtgcttacaactttgac
aacagcccagttcttcaggaatgggtgacagccacagatatcaaagtgaccctgaacagg
ctcaacacatttggagatgaagttttcaatgatcccaaggtcctaaagtcctattactac
gctatctcagactttgcagtgggaggaaggtgcaagtgcaacggccatgcgagtgagtgt
gtgaaaaacaacggcttcgacaagccggtttgcaactgcaagcacaacacagagggtgat
gactgcaatgtgtgcaagccgttctacaacgaccgtccctggaggcgagctacagccaat
aaccctaacgagtgtctgcagtgcaactgtaatggcaagagtgcagagtgctacttcgac
cctgagctgtaccgtgccactggccacggaggacactgtcgcaactgtgccgacaacaca
gacgggcctaactgcgagcgctgcctggacaaccactacagagacagatctggcaaccgc
tgcctgccctgcagctgcaacccagtgggctctctggccactcagtgtgacaacacagga
cgctgcagctgtaaaccaggtgtgatgggggacaagtgtgaccgctgccaacctggcttc
cacaccttgaccgaagcaggttgcagaccctgctcctgtaacccttctggaagcacacag
gagtgtgatgtccagacaggccgttgccagtgcaaggacaacgtggagggcttcaactgt
gacaggtgtaagcttggctacttcaacatggacccccagaacccgcagggttgcactccg
tgcttctgcttccagcattcctctgtgtgtgacagtgctgaaggttacagcatcgacact
gtttcctccaccttcgacaaaggtgatgagcagtggacagcccagcagcgtgacggctcc
agtgtttcagtccagtggtctgctggtggagaggagatctccctcatctctgaggactac
ttccccatgtactttgtggctccagagaggttcctgggcaatcagctgctgagttacggc
cagaacctcaccctgaacttccgggtagacaggagagacacacgcctttcggctgaagat
gtggttctggagggggctggcctcagagtggctgtgcctctcattgctcagggaaatgcc
tatcctggggagaacatgcagacgtttgtgttcaggctccacgacagcacagactacccc
tggaggcccaccctccctcagtctgaattccagaagctcctgcacaatctgacgtccatc
aagatccgtggcacctacagcgagagaagtgctggctaccttgacgatgtaatgctgatc
acggcgaggagtggtccagggaccccggcccgctgggtagagaagtgtacctgccctcag
ggctacatgggacagcattgtgagatgtgcgccctgggatacaggaggagcagaccagac
ctgggggccttcagttcctgtgacgcctgcaactgtaacggacacagtgacacgtgcaac
tccgacacagggatgtgtgactgccaacacaacacagctgggctcagttgtgagaggtgt
aaagacggttactatggagattccactgtggggagttccagcgactgcaagccctgcccc
tgccccggaggatccacttgtgctgtcgttcctaagaccaaggaggttgtctgcaccaac
tgtcccacaggaaccacaggcaagcgctgtgagctgtgtgatgacggtttcttcggagac
cccctgggtgagaacgggccggtgagggtgtgtcgggcctgtaagtgtagcgacaacatc
gaccccaacgctgtgggcaactgtgaccgagagaccggggagtgcctcaagtgtatctac
aacacagacggcttcttctgcgaccgctgcaaagagggcttctatggaaaccctctggcc
accaactccaacgacaagtgcaaaccctgctcctgctctccatacggcacagtggacaga
caaaccagctgtctgcaggtcacaggccagtgcccgtgtctcgcccacgtcaccaacagg
gactgcagcgcttgtgagcctggcttcttcaacctgcagagcggaacaggttgcgaacga
tgcacctgcaatcctattgggtccatcaatggtcagtgtgacatcggttccggtcagtgt
gaatgccagcccggcgtcaccggtctgcgctgtgaacgctgcgaggtcaacttctttgga
ttcggattgtctggctgcaaaccgtgcgactgcgacccagagggctcctctacgacccag
tgtaaggatgatggccgctgcgagtgccgcccaggctttgtgggagccaggtgtgacatg
tgtgaggagaactacttctacaaccgctctactctcggctgccagcagtgtccatcttgt
tactctctcgtcagagacaaggtgaaccagcagagacagaagctgcatgacctgcagaat
ttgattgacaacctgggctctacgtcggaggctgtcagtgacaaggcctttgaggaccgt
ctaaagcaggcagagaaagccatcatggacctgctggaggaggctcagaccagcaaagat
gtagacaaaggcctgctggagcgcctgggaaacctgaacaacacgctgaccactcagtgg
aaccgtctgcagaacatcaggaacagtgtggacgacamgggaacccagaccgacaaggcc
cgcaaccgggtccgagacgctgaggacctggtcgaccgcgcccgcgaggaactggataag
gccaaggacgccatcagcaaactggacatcaaaacaccctcaaacaccgcagatcctaac
aacatgacgcttctggcagaggaggctcgcaatctggccgacaaacataaaatggatgcg
gatcaaatcgagaagatcgccaaggatgccaacaacacatccaccaaggctytcaacctg
ctgatgaagactctagatggcgagggaaagaccaacaaagacattgacgagctcaacagg
aagtacaatgaagcaaaggacctggctaagaacctggagaaacaggccaacaaggtgcat
gctgaggcagaggaggcaggcgacaaagccctgaagatctacgctaacctgaccagcctg
ccacccttcaacaccaaatcactggaggacgaagcgagcaagatcaagaaggaggcgtca
gacctggacaaactgattgacaagacagagaaggagtacaacgacctgagggacgacctg
agagggaaggagactgaggtccgcaagctgctggagaagggaaagactgagcagcagact
gcagatcagttgctggctcgtgctgatgctgccaaggcgctggctgaggaggctgccagc
aaggggaggtccacctaccaggaggcccaagacattctgggaaatctgagagactttgac
aagagggtgaacgacaacaagacggcagctgagaacgccatgaagagaatcccagagatc
aacgccaccatcgctgcagccaatgagaagaccaagcaggctgagggggcgctaggcaac
gcagacgcagacgcaaaggaggccaagagcaaggcggaggaggcagagaagatagccagc
gttgtgcagaagggttctgctaagaccaaggcggatgcagagaaggcctttgaggacacc
aggaagctggatggagaggtcaataacatgatggaccagctaagtgcagcggaggcagag
ctggccaagaagaaggctgaggccgaccaggacatgatgatggctagcatggcatcagac
aatgcgaaggaagctgaggacaattcccggaaagccaagagtgctgtcaggaccgttctc
aacaccatcaacgacctgctcaagtcactgggcaacattgacaaggtggacctgagcaag
ctgggcttgattgaggggtcgctgaagcaggccaaagacaagatggcgaacagtgacctg
gaccgcaagctggcggagctgaacgacgtggccaagagccaggatgagatgatcaccgac
tacgacaggcagatcaaggagatccagtctgacatcgccaacctcaacgacatcaagaac
acgttacccaatggctgcttcaacaccccatccatagagcgggcttaa
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