Salvelinus sp. IW2-2015 (Arctic char): 111959035
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Entry
111959035 CDS
T05762
Name
(RefSeq) glutamate receptor ionotropic, kainate 3
KO
K05203
glutamate receptor, ionotropic kainate 3
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04080
Neuroactive ligand-receptor interaction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04080 Neuroactive ligand-receptor interaction
111959035
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111959035
Ion channels [BR:
salp04040
]
Ligand-gated channels
Glutamate (ionotropic)
111959035
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
ANF_receptor
Lig_chan
Lig_chan-Glu_bd
SBP_bac_3
Peripla_BP_6
Motif
Other DBs
NCBI-GeneID:
111959035
NCBI-ProteinID:
XP_023836217
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Position
LG35:complement(15864089..16010054)
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AA seq
919 aa
AA seq
DB search
MRNTWLSGGSSILEYWTSAILCLFWIQYSCGMPHVIRIGGIFEQTEGPVPLVSPEELAFK
FAVNNINRNRTLLPNTTLTYDIQRINIYDSFEASRKACDQLSLGVVAIFGPSHSSSSNAV
QSICNALEVPHIQVRWKHHPMDNRDTFYANLYPDYSSLSYGILDLVQFLKWKTATVVYDD
STGLIRLQELIMAPSRYNIRLKIRQLPLDGEDTRPLLKEMKRGREFRIIFDCSHEMAAQI
LKQAQTMGMMTEYYHYIFTTLDLMAIDLEPYRFCGVNMTGFRILNVDNPQVASIVEKWSQ
ERQIPPKPDSGLLEGIMTTDAALTYDAVHIVSVSYQHAPQMTVNSLQCHRHKPWRFGGRF
MNFIKESHWEGLTGRLSFNRTSGLRTDFDLDIISLKEEGLEKVGKWSSSGGLNITEVPKR
KGLNITDSLANRSLVITTILEEPYVMLKKSDKALVGNDRFEGFCIDLLKELASILGFTYE
IRLVPDGKYGSQDDKGQWNGMIKELMEHRADLAVAPLTITYLREKVVDFSKPFMSMGISI
LYRKPNTTNNGFFSFLNPMTPDIWVYILLAYLGVSCVLFVIARFSPYEWYDAHPCNPGSD
VVENNFTLLNSFWFGVGSLMQQGSELMPKALSTRIIGGIWWFFTLIIISSYTANLAAFLT
VERMESPVDSADDIAKQTKIEYGVVKDGATMSFFKKSKVSTFEKMWAFMSSKQSTSLVKS
IEDGIQRVLKSDYALLMESTTIDYITQRNCNLTQVGGVIDSKGYGIGTPMGSPYRDKVTI
AILSILEDGRLHMLKEKWWSGSSCLDEERREKAGPMGIQNLGGIFIVLASGLVLSVFVAI
AEFIYKLRKTAKREQRSFCSAMVDEIRQSFTCGTRVKHKPRHQVPVKTDAVINMHTFNDR
RLPGKDNLSCNTGMTPVFP
NT seq
2760 nt
NT seq
+upstream
nt +downstream
nt
atgcgaaacacttggttgtctggcgggagttcgattttggaatactggacatcggccatt
ctatgtctcttttggattcagtactcttgtgggatgcctcatgtcattcgaatagggggg
attttcgaacaaacagagggaccggtgccgctcgtcagcccagaggagcttgcctttaaa
tttgcagtgaacaacatcaacagaaacaggactttattgcccaacacgacgttaacgtac
gacatacagaggattaatatctacgacagttttgaagcgtcgagaaaagcctgtgaccaa
ctgtctttaggtgtagtggcaatatttgggccgtcacatagctcgtcctcaaacgccgtc
cagtccatctgcaatgcgttggaagtgccacacatccaggtgcgatggaaacatcaccct
atggacaacagggacacattttacgccaacctgtacccggattactcttctctcagctac
ggcatcttggatttggtgcagttcctgaagtggaaaacagccacagtcgtatacgatgac
agtacaggtcttattagactacaggaactgataatggccccctccaggtataacatcagg
ctaaagattcgccagctccctcttgacggtgaggacaccaggcctctcctcaaggagatg
aagagaggacgggagtttcgcattattttcgactgcagccacgaaatggctgcacagatc
cttaaacaggcccagacaatgggaatgatgacagagtactaccactacatcttcaccact
ctggacctcatggctatcgacctggagccctaccgtttctgtggcgtcaacatgaccggc
ttccgcatcctcaacgtggacaaccctcaggtggcgtccatcgttgagaagtggtcccaa
gagaggcagatacctcccaagcccgactcgggtctcctggaggggatcatgacgacagat
gctgctctgacgtacgacgcggtccacatcgtgtccgtctcctaccagcacgcaccacag
atgacggtcaactcgctgcagtgccaccgccacaagccatggaggttcggcggacgcttt
atgaacttcatcaaggagtctcactgggaaggcctgacggggaggctgtcgttcaacagg
accagtggcctccgcacagactttgacctggacatcatcagcctgaaagaggagggcctg
gagaaggtggggaagtggagttcgtccggaggtctcaacatcaccgaggtccccaagcgg
aaagggttgaacatcacagactcgctggccaaccgttccctggtcatcaccaccatcctg
gaggaaccatatgtcatgcttaagaagtctgacaaggcgctggtgggcaatgaccgtttc
gagggattctgtatcgacctgctcaaggagctggccagcatcctgggcttcacctacgag
atccgcctggtgcctgatgggaagtacggatcgcaggacgacaagggccagtggaacggc
atgatcaaggagctgatggaacacagagccgacttggctgtggcccctcttaccattacc
tacctgcgtgagaaggtcgtggacttctccaagcccttcatgagcatgggcatcagcatc
ctgtaccgcaagcccaacaccaccaacaacggcttcttctccttcctcaaccccatgacc
ccggacatctgggtctacatcctgctggcctacctaggcgtcagctgtgttctcttcgtc
atcgccaggttcagtccgtacgaatggtacgacgcccatccctgcaatcccggatccgat
gtggtggagaacaacttcaccctccttaacagcttctggttcggtgtgggctccctcatg
cagcaaggctctgagctgatgcccaaagccctgtccaccaggatcatcggaggcatctgg
tggttcttcaccctcatcatcatctcctcctacacggccaacctggccgccttcctcacc
gtggagcgcatggagtcgcccgtggactctgccgacgacatcgccaagcagacaaagatt
gagtatggcgtggtcaaagacggtgccaccatgtctttcttcaagaaatcaaaggtttct
acttttgagaagatgtgggcctttatgagtagtaaacagagtacgtcgctggtcaagtcc
attgaggacggcatccagagggttctgaagtctgactatgccttgctcatggagtccacc
acaatcgattacattacccagcggaactgcaacctcacccaggttggaggcgtcattgac
agcaaaggctatggaataggcactcccatgggctctccataccgggacaaagtgaccatc
gccatcctgagcatcctggaagatggccgtctgcacatgctcaaggagaagtggtggagc
ggcagcagctgtctggacgaagagcgccgtgagaaagccggccccatgggcattcagaac
ctgggagggatctttatagtgctggcgtctggcctggttctctccgtctttgtggctata
gccgaattcatatacaagctaaggaagacggcgaaacgtgagcagaggtctttctgcagt
gccatggtggacgagatcagacagtcgttcacctgcgggacgcgtgtgaaacacaagccc
cgccaccaggtcccggtcaagacggatgcagtgatcaacatgcacacgttcaacgaccgg
cgactcccgggaaaggacaacttgagctgcaacactgggatgacccccgtgttcccgtga
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