KEGG   Salvelinus sp. IW2-2015 (Arctic char): 111960305
Entry
111960305         CDS       T05762                                 
Symbol
pnkp
Name
(RefSeq) bifunctional polynucleotide phosphatase/kinase isoform X1
  KO
K08073  bifunctional polynucleotide phosphatase/kinase [EC:3.1.3.32 2.7.1.78]
Organism
salp  Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:salp00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    111960305 (pnkp)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01009 Protein phosphatases and associated proteins [BR:salp01009]
    111960305 (pnkp)
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:salp03400]
    111960305 (pnkp)
Enzymes [BR:salp01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.1  Phosphotransferases with an alcohol group as acceptor
    2.7.1.78  polynucleotide 5'-hydroxyl-kinase
     111960305 (pnkp)
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.3  Phosphoric-monoester hydrolases
    3.1.3.32  polynucleotide 3'-phosphatase
     111960305 (pnkp)
Protein phosphatases and associated proteins [BR:salp01009]
 HAD phosphatases
  Other HAD phosphatases
   111960305 (pnkp)
DNA repair and recombination proteins [BR:salp03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Other BER factors
     111960305 (pnkp)
SSDB
Motif
Pfam: PNK3P FHA_2 AAA_33 BRX_N Hydrolase_6
Other DBs
NCBI-GeneID: 111960305
NCBI-ProteinID: XP_023838029
LinkDB
Position
LG4p:9431786..9437536
AA seq 619 aa
MDTVRYLFFPTSYCLLSLQMQQCTLLSASGARVPLADGRAVILGRGPETXVIDKKCSRHQ
VKLVACYADKEVLVTQLGPNPSSLGSESLGRGQSGRLTHDSTLYLVNQSHPFRVQFSASN
ETSSSSAQKGKXVERLKALDKTKGGKNDRXREVQSTGPKRSIQXFFASSPKKASKRSHRS
EEDPQEKRRRTTGSDSGGEDEAEKLAEEKLRHLQEMSERASGASRDCVQQQASVSACSRS
HWQQIGNLMLYTAVGVTGSTKIAGFDIDGCIITTNSGKVFPTSPDDWRILFPEIQPKLAS
LLKKGYKVVFFTNQMGISRGKLKPEDFKSKVENILKTLQLPIQVFVASGPGIYRKPVMGM
WEHLCEKDNGGVAVDKSQSLYVGDAAGRPVNWAPGKKKKDFSCSDRLFALNLGLQFHTPE
EFFLGWKTAPFSLPPFDPRKCDSNARLYDPPSASLTSTKQEVIIAVGFPASGKSSFFHTH
IVPKGYVYVNRDTLGSWQSCVSACERALKEGRSVAVDNTKPDPESRKRYVDVSQSLGVSC
RCFNFSASLEQAKHNNRFREMAPSTTKHLKVNDMIFHSYKKKFVVPSLSEGFSEILQIHF
VPTFTDSQSEALFRQFSEG
NT seq 1860 nt   +upstreamnt  +downstreamnt
atggacaccgtacgttatttgtttttccctacatcctactgtctcttgtctttgcagatg
cagcagtgcacattactcagtgcatccggcgctcgtgtcccactagccgatggccgagcc
gtgatcctaggtcgtggtccagagactygagttattgacaagaagtgctcccgacaccag
gtgaagctggtggcctgttatgcagacaaggaggtacttgtaacacagcttggtcccaac
ccctcatccttgggcagtgagagtcttggtagaggccagtctggccgactgacccatgac
agcaccctctacctggttaaccagagccaccccttcagagtgcagttctctgcttccaac
gaaacctcctcatcctctgcccagaaggggaagyttgtagaaaggttgaaagcattggat
aagacaaaaggaggaaagaatgacagagygagggaggttcaaagcacaggtcccaaacgc
agcatccaamacttttttgcttcctctcccaagaaggcatccaagaggtcacaccgttct
gaggaggacccgcaggagaagcgtaggaggactacaggctccgacagtgggggcgaggac
gaggctgagaagcttgctgaggagaagctccgacacctccaggagatgtcagagagggct
tcaggggctagcagagactgtgtccagcagcaggcatcagtctcggcctgttctcgaagc
cactggcagcagattggaaacctcatgctctacactgctgttggcgtcactggaagcacc
aagattgctgggttcgacattgacgggtgtatcatcaccaccaattctggaaaagtgttt
cccaccagcccagatgactggaggattctctttcctgagatccaacccaaactggccagc
ttattaaagaaaggctacaaggttgtgtttttcaccaatcagatgggtatatctaggggg
aaactgaagcctgaggatttcaagtctaaagtggagaacattctgaagacattacagctc
cccatacaggtctttgtggcgtctggtcctgggatctacaggaagccagtgatggggatg
tgggagcacctgtgtgagaaggataatggcggtgtggctgtagacaaaagccagagtctc
tatgtgggagatgcagcgggacggcctgttaactgggctcctggcaagaagaagaaggac
ttttcctgcagtgaccgactgtttgctctgaaccttggactacagttccacacgccagag
gagttcttcctgggctggaagaccgcccccttcagtcttcctccatttgaccctaggaaa
tgtgactctaacgcccgtctatatgacccgcccagtgcctccctcacctccaccaagcag
gaagtaatcattgccgtgggtttccctgcttctgggaaatcatcctttttccacacacac
atcgtccccaaaggttacgtgtacgtgaacagggacaccctgggctcgtggcagagctgt
gtttcggcctgtgagcgggctctgaaggaggggcgcagcgtggcggtggataacaccaar
ccagaccctgagtctcgcaaacggtatgttgacgtcagccagagtttgggcgtgtcctgt
cggtgcttcaacttctctgcctccctggagcaggccaagcacaacaacagattccgtgag
atggccccctccaccaccaagcacctcaaagtcaatgacatgatcttccacagttacaag
aagaagtttgtggtgcccagtctctcggaaggcttttcagaaatcctgcaaattcatttt
gtcccaacctttacagacagccaatcagaggccctcttcaggcagttctctgaaggctga

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