Salvelinus sp. IW2-2015 (Arctic char): 111960534
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Entry
111960534 CDS
T05762
Name
(RefSeq) estrogen-related receptor gamma-like
KO
K08554
estrogen-related receptor gamma
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111960534
03029 Mitochondrial biogenesis [BR:
salp03029
]
111960534
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
salp03310
]
111960534
Transcription factors [BR:
salp03000
]
Eukaryotic type
Zinc finger
Cys4 estrogen receptor-like
111960534
Mitochondrial biogenesis [BR:
salp03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
111960534
Nuclear receptors [BR:
salp03310
]
3. Estrogen like
3B. Estrogen-related receptor
111960534
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Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
CobN-Mg_chel
Motif
Other DBs
NCBI-GeneID:
111960534
NCBI-ProteinID:
XP_023838333
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Position
LG4p:complement(12327242..12334051)
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AA seq
461 aa
AA seq
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MDLKDFCLSENVHFLSQHNHLLDSSNTDDAPSLDDTCIKTDPXSPTFALDRTTAFSPSSD
SSGYSLFSPGHSLDPESPSSSSSGSGVSAAPDCSSASQFCSDRSLALSAHVDSILKCDYL
SSLGSGPKRLCLVCGDFASGYHYGVASCEACKAFFKRTIQGNIEYGCPLVNDCEITKRRR
KSCQACRFRKCLHAGMMKEGVRMDRVRGGRQKYKRRGDSGLSLYMKAPDTHLVKANGNKV
ISQLLLTESAPLCATPDNSTNDDNLKALLTLCDLLNRELLVMIGWAKHIPGFSALSLVDQ
MALLQSGWMETLVLSVVSQSLGYGEELVFAGNLHLDQAQCRAAGLSDLYTALRQLTTKYR
QMNLSREEVVTLKAMALANSDAENLESVEAVQRFQDGLHEALQEYESAQNPAELHRAGKL
LMTLPLLRQSANRAVDTFCRLHLEGHVPMHKLFLEMLDAKI
NT seq
1386 nt
NT seq
+upstream
nt +downstream
nt
atggatctaaaggatttttgcctgagtgaaaatgtccacttcctcagccagcacaaccac
ctgttggactcctcaaacaccgacgacgctccttcactagatgatacatgtatcaagacg
gatccctrcagccctaccttcgccctggacagaaccacagcattcagtcccagctcggac
agcagtggatacagtttattctcaccgggtcactcgctggacccggaatccccgagttcg
agcagcagcggcagcggtgtcagcgcagcaccggactgtagcagcgcatctcagttttgc
tcagaccgcagtttggcgctctctgcgcacgttgattctatcctcaaatgtgactactta
tcgtcgctgggctctggacctaaaaggctgtgtctagtttgtggcgactttgcatcggga
tatcactacggagtagcgtcgtgtgaggcytgcaaggctttcttcaagaggacaattcaa
ggtaacattgagtacggctgccctttggtgaacgattgtgagatcaccaagcgtcgtagg
aagtcgtgccaagcgtgccgcttccggaagtgcctgcatgccggcatgatgaaggaaggt
gttcgcatggaccgagtaagaggaggacgtcagaagtacaagagaaggggggactctggc
ctctctctttatatgaaggccccagacacacacctcgtcaaggccaacggaaacaaagtg
atctcccagctcctcttgacagagtcagcccccctgtgtgccacgccggacaactcaacc
aatgatgacaaccttaaagccctgctgacgctttgtgacctcctaaacagggaactcctg
gtcatgattggctgggcaaagcatatcccaggcttctctgccctttcattggtggaccag
atggccctgctgcagagtggttggatggagacgctggtcctgtcagtggtgtctcagtct
ctgggctatggggaggaactggtgtttgctgggaacttgcatctggaccaggcccagtgc
agagcggccggactctctgacctctacactgccctgagacagctgaccaccaagtacagg
cagatgaacctgagccgagaggaagtggtcactctcaaggccatggccctcgccaactca
gacgcagagaacctggagagtgtggaggcagtgcagcggttccaggacggactccatgaa
gccctgcaggagtacgagagcgcccagaacccagcagagctccaccgggcaggcaaactg
ctcatgaccctgcccctgctccggcagtctgccaaccgtgccgtggacaccttctgccgg
ctccacctggagggccacgtgcccatgcacaaactcttcctggagatgctggacgccaaa
atatga
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