Salvelinus sp. IW2-2015 (Arctic char): 111964054
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Entry
111964054 CDS
T05762
Name
(RefSeq) ATP-dependent RNA helicase DQX1 isoform X1
KO
K14433
ATP-dependent helicase [EC:5.6.2.-]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
salp03041
]
111964054
Spliceosome [BR:
salp03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111964054
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Gene cluster
GFIT
Motif
Pfam:
OB_NTP_bind
HA2_C
HA2_N
AAA_19
AAA_22
AAA_25
nSTAND3
Motif
Other DBs
NCBI-GeneID:
111964054
NCBI-ProteinID:
XP_023843500
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All DBs
Position
LG5:complement(22049756..22077140)
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AA seq
824 aa
AA seq
DB search
MMSSPSVATPLTTSPPTLRPPSALDSLSMSSLLSGDLEDEVGEEGGLGDLEVNPYDGLPF
SSRYYSLLEERKTLPLWGLKYRLLEHLETHSMVVVSAPSGTGKSTQVPQWCVEYALSHEF
SQGLVCCSQPYAVAAGSLALRVADEMDLSLGLEVGYWVPHDDGCTPDTLLRFVSDSLLLG
EMMSDPLLRQYGVLVVDEVQERTVPSDVLLGLLLDVCCQRPDDLRVVLLTDPSLASSLAT
FLGEGVPVLTLDEPVVDEDRPVRDTPDTETRRRPPVVVETVYRDPGGRESAAAACYMVLD
LHRRGEEGDVMVFLSSAQGHCNLRLLNGIREIDECGSLLEKESVALSPQLGTLRVLHLHA
GLGGATQRVYEAEPEGPSGDTEGSNGSEGLEGPGIGMGTGARRRVILTDTLGEASFSLSG
VRYVIDTGMQLKTVYNPQIRADSQVLRPISRQQADMRTQRVNGDLPGLCLRLYPQALYVE
GMAETRSPGVVEENLSHLVLLLKRLDIADMGQCKFLDRPAPEALMQALEDLDYLAALDDD
GNLSEVGIIMSELPLEPPLAKALIAACEFDCVNELLTIAAMLTASPCFVTPTPQREEAAA
THRRPLLHNEGDHLTLINIYNAYIQHNEDDAWCTTNFLNPAALRLAVVIRAELLEVMQRI
ELPVSPPSFGCQDNCTNIKRALISGFFLKVAHDVDGSGNYLLLTHRHVAHLHPFSSYLCR
RPRLNPPSWVLYHEFTISHDNCICTASEVHPHMLVELAPLYYLGNLPSSEGRDLLMELRQ
SLLPPEEVQERGPEGVYDTRHIEEHLDRTGDPRNQDSTELCVIQ
NT seq
2475 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcgtcaccctccgtggccacccccttgacaacgtccccccccaccctccgcccc
ccctccgccctagactctctctccatgtcctctctactgtccggggacctagaggatgag
gtgggggaggagggcggcctgggggacctggaggtgaacccgtatgatggcttgcccttc
tcatcacgctactactctctgctggaggagaggaagacgcttcccttgtggggcctcaag
taccgcctgctggagcacctggagacacacagcatggtggtggtcagtgcccccagtggc
acaggcaagagcacacaggtgccccagtggtgtgtggagtacgccctgtcccatgagttc
tctcagggcttggtgtgctgttcccagccctatgctgtggctgcagggagtctggccctc
agggtggctgatgagatggacctgagtctgggcctggaggtgggctactgggtcccccac
gacgatggctgtacccctgatacactacttaggttcgtcagtgactctctgctcctgggg
gagatgatgtcggaccccctgctgcgtcagtatggggtgctggtggtggatgaggttcag
gagcgcactgtgccctccgacgtccttctgggcttgctgctggacgtgtgctgccagcgc
cccgacgacctccgcgtggtcctcctcaccgacccctcccttgcctccagcctcgccacc
ttcctgggtgagggagttccggttctaacgctggatgagcctgtcgtggatgaggaccgg
cccgtcagagatacgcccgacacagagacaaggaggaggccaccggttgtcgtggaaacg
gtgtacagggatcctggagggagggagtctgcggcagcagcatgttacatggtgttggat
ctccaccgcaggggagaggaaggggatgtcatggtctttctctccagtgcccagggacac
tgtaatcttagactgctgaatggcatcagggagattgacgagtgtggctctctgctggag
aaggagtctgtggccctgagccctcagctggggaccctcagagttctgcacctccacgca
ggccttggaggggctacccagcgcgtctatgaagccgagccagaggggccttctggggac
acggaggggtccaatgggtctgaaggactggaagggccagggatagggatggggacggga
gcgaggcgcagggtcatcctcacagacaccttgggggaggcctccttctctctatctgga
gtccgctatgtcatagacacaggcatgcaacttaagacagtttacaaccctcaaattaga
gcagactcccaggtcctgcgtccaatcagccggcagcaggcagacatgcggacgcagagg
gtaaacggtgacctaccaggtctgtgtttacgtctgtacccccaggctctgtatgtggag
ggcatggcggagacccgcagcccgggggtggtggaggagaacctcagccacctggtgctg
ctgctcaagagactggacatcgccgacatgggccagtgcaagttcctggacaggcctgct
ccagaggctctgatgcaggctctagaggacctggactacctggcagcactggatgatgat
gggaacctatctgaggtgggcatcattatgtcagagctgcccctggagcccccgctggcc
aaggccctcatcgctgcctgcgagtttgactgtgtcaacgagctgctcaccatcgctgcc
atgctcacagcttccccctgctttgtgacccccacaccccagagagaggaggcagcagcc
actcacagacgccccctgttgcacaacgagggagaccacctcaccctcatcaacatctac
aacgcctacatacagcacaatgaggatgatgcctggtgtactaccaacttcctgaacccc
gccgcattacgattggctgtggtgatcagggcggagctgctggaggtgatgcagcgaata
gagttgcccgtctcgcctccttcctttggttgccaagacaactgcactaatatcaagcgt
gcactcatctcagggttcttcctcaaggtggctcatgatgtggacggctcaggtaactac
ctcctgttgactcaccgtcacgtggctcacctccaccccttctcctcctacctgtgtcgc
cggccgcgcctcaaccccccctcctgggtgctgtaccacgaattcaccatctcccacgac
aactgcatctgcaccgcctccgaggtgcacccccacatgttggtggagctggcccctctg
tactacctaggcaacttgccgtccagcgagggacgggaccttctgatggagctgagacag
agtctgctgcccccagaggaggtacaggagaggggcccagaaggggtctatgacacacgc
cacattgaggaacacttagacaggaccggagatccacgtaatcaagacagtactgagctg
tgtgtcatacagtga
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