Salvelinus sp. IW2-2015 (Arctic char): 111967353
Help
Entry
111967353 CDS
T05762
Symbol
pde6a
Name
(RefSeq) rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha
KO
K08718
rod cGMP-specific 3',5'-cyclic phosphodiesterase subunit alpha [EC:
3.1.4.35
]
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp00230
Purine metabolism
salp01100
Metabolic pathways
salp04744
Phototransduction
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09100 Metabolism
09104 Nucleotide metabolism
00230 Purine metabolism
111967353 (pde6a)
09150 Organismal Systems
09157 Sensory system
04744 Phototransduction
111967353 (pde6a)
Enzymes [BR:
salp01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.35 3',5'-cyclic-GMP phosphodiesterase
111967353 (pde6a)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDEase_I
GAF
GAF_2
Motif
Other DBs
NCBI-GeneID:
111967353
NCBI-ProteinID:
XP_023848069
LinkDB
All DBs
Position
LG8:complement(8172075..8191329)
Genome browser
AA seq
859 aa
AA seq
DB search
MAAVDKDVAEKFLDSNPDFAKQYYDTKFRPKVISDLFKDNKTSQVNTSSFHELSTVEESE
IIFDMVRDLQDNIQMEKAIFNFMKHLSFMIRSEKMSLFMYRMRNGTAELATRLFNVHKDA
TLEECLVQPDSEIVFPMDIGIVGHVATTKKTVNIPDVSESSHYSDFVDQIQEYQTKSVLA
TPIMNGKDMVAVMMAVNKIGAPHFTKQDEETLLKYLNFANLILRVFHLSYLHNCETRRGQ
VLLWSASKVFEEMTDIERQFHKALYTIRDFLNCERYSVGLLDMTKTKEFYDLWPVLMGEV
PQYDGPKTPDGREINFYKVIDYILHGKEEIKVLPNPAPDHWALVSGLPTYVAKEGLICNI
MNAAQDDFFSFQKGPVDSSGWIIKNVLSLPIVNKKEEIVAVATFYNRKDGKPFDEQDETL
MESLTQFLGWSVLNTDTYDKWNKLENRKDIFQDMVLYHIKCRTDETQNVLNTRERYGKEP
HECEEVELEAILSEVLPPSSKSELFEFHFCDFEHSHLDLVKLGIKMYYELGVVDKFHVPR
ETLTRFCYSLSKGYRQITYHNWSHGFNVGQTMFTLLMTGDLKRYYTELETMAMVTAGLCH
DVDHRGTNNLYQMKSGNPLAKLHGSSILERHHLETGKTLLRDPALNIYQNLSRAQHEHVI
HLMDIAIIATDLALYFKKEPCSRKIVDQSKTYETWDEWTKYMTQQTTRKEIVMAMMMTAC
DLSAIAKPWDIQSKVALSVAAEFWEQGDLERTVLEQQPIPMMDRTKSADLPKMQCGFIDF
VCAFVYKEFSRFHVEITPMLDRLLNNRKEWNALKEIHEAKLAALEEAKTAKEEVAVAATA
AKQASAAEAGPQSKTCVVN
NT seq
2580 nt
NT seq
+upstream
nt +downstream
nt
atggcagccgtggacaaagatgtggctgagaagtttctggacagcaaccctgactttgcc
aagcagtactatgataccaagttccgcccgaaggtcatctcggaccttttcaaagacaac
aagacttcccaggtgaacaccagcagcttccacgagctgagcacagtggaggagagtgag
atcatatttgacatggtcagagacctgcaggacaacatccagatggagaaggctatcttc
aacttcatgaaacatctcagcttcatgatacggtcagagaagatgagcctgttcatgtac
cggatgcgtaacggcacggccgagctggccacgagactcttcaacgtgcacaaggacgcc
accttggaggagtgcctggtccagccagacagtgagatagtctttcctatggacatcggc
attgtgggccatgtggccaccaccaagaagactgtcaacatcccagatgtctcagagagc
agccactacagtgactttgtggaccagatccaagaataccagaccaagagtgtcttggct
acccccatcatgaacggcaaggacatggtggctgttatgatggctgtgaacaagattgga
gctccacacttcactaagcaggatgaggagactctgttgaagtatctcaactttgccaac
ctgatcctaagagtgttccatttgagctaccttcacaactgtgagaccagaagaggacag
gtcctgctctggtctgccagcaaagtgtttgaggagatgacagacattgagagacagttc
cacaaggccctctataccatcagggatttccttaactgtgaacgttactctgttggcctc
ctggacatgaccaagactaaggaattctatgacctttggcctgtgctaatgggagaggtg
cctcaatacgatggacccaagactcctgatggcagagaaataaacttctacaaagtgatt
gactacattttacatggaaaagaggagatcaaagttttacccaaccctgctccggaccac
tgggctctggtcagtggcctgcccacctacgtggctaaggagggactgatctgtaacatt
atgaacgcggcacaagatgacttcttcagcttccaaaaagggcccgtggatagctccggc
tggatcataaagaacgtcctgtccctccccatcgtgaataagaaggaggaaatagtcgca
gtagccaccttctacaacaggaaagatgggaaaccctttgacgagcaggatgaaactctg
atggagtctctcacccagttccttggctggtctgtgctcaacacagacacctatgacaag
tggaacaagctggagaacaggaaggacatcttccaggacatggtgctgtaccacatcaag
tgcaggacggatgagacccagaatgtattgaataccagggagaggtatggaaaggaacca
catgagtgtgaggaggtggaactggaagcaatcctgtcggaagttcttccaccctcttcc
aagtcggagctctttgagtttcacttctgtgactttgagcacagtcatctagacctggtc
aagttaggcattaagatgtactatgagttgggagtggtggacaagttccacgtcccccgt
gagaccctcaccaggttctgttactccctyagtaagggctacaggcagatcacctaccac
aactggagtcatggcttcaacgtgggccagaccatgttcactctgctcatgacaggtgac
ctgaagcgttattacacagagctagagaccatggccatggtaacagccggcttatgccac
gatgtcgaccacagaggcaccaataacctctaccagatgaagtctggaaaccctctcgca
aagctccacggctcctccatcctggagagacaccatctggagactgggaagaccctgctg
agagaccctgccttaaatatttatcagaatctcagtcgtgctcagcacgagcatgtcatt
catctgatggacatcgccatcatcgccactgacctcgctctctacttcaaaaaagaacca
tgttccagaaagattgtggaccaatcgaagacctacgagacctgggatgagtggaccaag
tacatgacgcagcagaccactcgcaaggagatagtcatggctatgatgatgacggcctgc
gatctgtctgctattgccaaaccatgggacatccagagcaaggtggcgctgtctgtggct
gcagagttctgggarcagggtgacctggagaggactgtactggaacagcagcctattccc
atgatggacaggactaaatcagctgatcttcccaagatgcagtgtggtttcatcgatttt
gtctgtgcttttgtgtacaaggagttctcccgtttccatgtggagatcactcccatgctg
gaccggctgctgaacaacaggaaggagtggaatgctctgaaggagatacacgaagctaag
ctggctgctctggaggaggccaagacagccaaggaggaggtagctgttgcagccaccgca
gccaagcaggcgagtgcagctgaagcaggcccccagtcaaagacctgtgttgtcaactag
DBGET
integrated database retrieval system
