Salvelinus sp. IW2-2015 (Arctic char): 111971077
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Entry
111971077 CDS
T05762
Name
(RefSeq) integrin beta-6-like
KO
K06589
integrin beta 6
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04510
Focal adhesion
salp04512
ECM-receptor interaction
salp04810
Regulation of actin cytoskeleton
salp04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
111971077
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
111971077
09142 Cell motility
04820 Cytoskeleton in muscle cells
111971077
04810 Regulation of actin cytoskeleton
111971077
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
salp04147
]
111971077
04515 Cell adhesion molecules [BR:
salp04515
]
111971077
Exosome [BR:
salp04147
]
Exosomal proteins
Exosomal proteins of epithelial cells
111971077
Cell adhesion molecules [BR:
salp04515
]
Integrins
Integrin beta subunits
111971077
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Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
Integrin_b_cyt
PSI_integrin
Integrin_B_tail
PSI
Motif
Other DBs
NCBI-GeneID:
111971077
NCBI-ProteinID:
XP_024003115
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Position
LG12:complement(5374753..5388186)
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AA seq
601 aa
AA seq
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MGIAVLLVLILRHWINNVEGTCSVGSAVTCDECLQLGPHCAWCTQENFTDSFLISERCDT
PYVLLERGCAQDLVEFPVTNSEVHKDQPLGKKTGNTNSTQISPQKMXLKLRTGSEVTFQI
SVQQTEDYPVDIYYLMDLSASMIDDLEMIKDLGSTLSKEMAKLTSKFRLGFGSFVEKPVL
PFIKITPGELENPCRSVDESCLPTFGYKHVLPLTSSTEKFNNIITNQRVSANIDLPECGF
DAIMQAAVCGDKIGWRNDSMRLLVFVSDADSHFGMDSKMSGIVVPNDGECHLDSNNEYSM
AAHLEYPTLGQLMDKLVDNNILLIFAVTDNQKHNYENYAHFIPGATVGVLESDSRNILEL
IVTAYKVRVRFCLWVYSVFVRPPGDRPGVPVLLLPVTDPEPNSKPLQPGPSLECGSCLCR
FPDLAKASSVHSLSGDTNNPPVKASTQHVTDVVYVCVFLRTCVECHLQAEDEATEECVQR
CSVPHVFVNNSTEYDESRSTLCTLMSENNCFNLVQPPNIAMIVLGVSLSILTIGLILLGV
WKLLISVHDRNEVAKFEAERAKAKWQSGTNPLFRSSTSTFKNVTYKSAGGLKVDIHSMDG
Y
NT seq
1806 nt
NT seq
+upstream
nt +downstream
nt
atggggattgctgtacttctggtcctgattcttcggcattggatcaacaacgtggaggga
acatgttcggttggcagcgcagtgacttgtgacgagtgtctccagctgggtccccactgt
gcatggtgcacacaagagaatttcacagactcgtttttaattagtgagcgatgtgacacg
ccgtacgtcctcctagagagaggctgtgcccaggacctggtagaatttcctgtgaccaac
tccgaggtccacaaggaccagcctctcgggaagaaaacggggaataccaacagcacacag
atatcaccacagaagatgmccctcaaactcagaactggcagtgaggtgaccttccagatc
agtgtgcagcagacagaggactaccctgtagacatctactacctgatggacctctcagcc
tccatgattgacgacctggagatgattaaagacttgggctccaccctgtccaaagagatg
gcaaagctcaccagtaaattcagacttggattcgggtccttcgttgagaaaccagtcctc
ccgttcattaagatcactcctggagagctggagaacccttgtaggagtgtggatgagagc
tgtctgccaacatttggatacaaacacgtcctacctctcaccagcagcacagagaagttc
aacaatatcatcaccaaccagcgtgtgtctgccaacatcgacctgccggagtgtggcttc
gatgccattatgcaggctgctgtctgtggagacaagataggctggaggaacgactccatg
cgcctgctggtgtttgtgagcgacgccgactctcactttgggatggacagcaagatgtca
ggcatcgtcgtccctaacgacggggagtgccatctggacagcaacaatgaatactctatg
gctgcccatctggaatacccaactctgggacagctgatggataaactggtggacaacaat
atcctgcttatattcgctgtgacggayaatcagaaacacaactacgagaactatgcacat
ttcatacctggtgccactgtgggggttctggaatcagattcaaggaacatcctggaactg
attgtgacggcgtataaagtaagagtccgattctgtctgtgggtgtacagtgtgtttgtc
agaccccctggagatagacctggagtccctgtgctcctgttgcctgtcacagaccccgag
cccaacagcaagccactgcagcctgggccgtctctggagtgtggctcctgtctgtgtaga
ttcccagatctggccaaggcttcttctgttcactctttatcaggggacacaaataaccct
cctgttaaggccagcactcaacacgtgacagatgttgtgtatgtgtgtgtgttcctcagg
acctgtgtggagtgtcatctacaagcagaagacgaggccacagaggagtgcgtccaaagg
tgcagcgtccctcacgtcttcgtcaacaattccacagaatacgacgagagccggtccacg
ctgtgcaccctaatgagtgagaacaactgcttcaatctcgttcagccccccaacatagct
atgatagtactgggggtctctctgtccatcctcaccatcggcctcatcctgctgggggtg
tggaagctgctgatctcagtccacgaccgcaatgaggtcgccaagtttgaggccgagagg
gcaaaggctaaatggcagtcgggtacaaaccctctgtttagaagctcgacatcaacgttt
aaaaatgtaacttataaaagcgcagggggactgaaagttgatattcattcaatggatggc
tattga
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