Salvelinus sp. IW2-2015 (Arctic char): 111972305
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Entry
111972305 CDS
T05762
Name
(RefSeq) LIM/homeobox protein Lhx4-like
KO
K09374
LIM homeobox protein 3/4
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111972305
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain LIM
111972305
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
LIM
Homeodomain
Homeobox_KN
Furin-like_2
Motif
Other DBs
NCBI-GeneID:
111972305
NCBI-ProteinID:
XP_023855059
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Position
LG13:17069532..17082150
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AA seq
389 aa
AA seq
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MMQSAAVLPTESPVKGLPEILGVPMQQIPQCASCSQHILDKFILKVLDRHWHSKCLKCAD
CQALLADKCFSRAGNVYCKEDFFKRFGTKCASCQQGIPPTQVVRKAQDFVYHLHCFACVM
CSRQLATGDEFYLMEDGRLVCKEDYETAKQNDDSEAGAKRPRTTITAKQLETLKIAYKNS
PKPARHVREQLSSETGLDMRVVQVWFQNRRAKEKRLKKDAGRHRWGQFYKSVKRNRGGNK
VEKESSADDAGLSDSELSFRDDQILSDLGHTNGLYGSVGDVANGGLLNGGFSLDAAGQPY
HDIRPGSPYGLPQSPSSIASLSGHTPLLNNLGFTMDSIMIQGGQGGVGQALRAMAGGPTS
DLSTGSSTGYPDFPTSPASWLDEMDHSQF
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatgcaaagtgcggctgttctaccaacagagagtcctgtgaagggtctaccggagata
ctcggtgtgccaatgcaacaaatcccccagtgtgcgagctgtagtcaacacatcctcgac
aagttcatcctgaaggtgctggaccgccactggcactccaagtgcctcaagtgcgccgat
tgtcaagcgttgctggcagacaagtgtttctcgcgggcgggaaatgtgtactgcaaagag
gactttttcaagcggtttggaacaaagtgtgcgtcatgccaacaggggataccgccgacc
caggtggtgcggaaggcccaggactttgtgtaccacctgcactgcttcgcctgtgtcatg
tgcagccggcagctggccactggggatgagttctacctcatggaagatggcaggctggtg
tgcaaggaggactacgagacggccaaacagaatgatgattcagaggcaggtgcaaagcga
ccacgaaccaccatcacagccaaacagctggagacccttaaaatcgcctacaagaactct
cccaagccagcgcgccacgtccgcgagcagctctcctcagagacggggctggacatgaga
gtagtgcaggtgtggtttcagaatcgtcgtgcaaaagagaagcgtctgaagaaggacgca
gggcggcaccgctggggtcagttttacaaaagcgtcaaacgtaaccgagggggcaacaaa
gtggagaaggagagttcagcagacgatgcgggactgagcgacagtgagctcagcttcaga
gacgaccagatcctgtcagacctgggccacaccaacggtctatatgggagtgtgggcgac
gtggccaacggaggcttgttgaacggaggcttctctctggacgctgctggacaaccctat
catgacattcggccgggcagtccctacggcctcccccagtcgccgtcgtccatcgcctcg
ctgtccggccacaccccgctgctcaacaacctgggcttcaccatggacagcatcatgatc
cagggggggcagggtggcgtgggacaggctctcagggccatggcaggaggccccacctct
gacctctccacagggagcagcacgggctacccagacttccccaccagccctgcctcatgg
ttggacgagatggaccactcccagttctga
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