Salvelinus sp. IW2-2015 (Arctic char): 111973366
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Entry
111973366 CDS
T05762
Name
(RefSeq) homeobox protein AKR isoform X1
KO
K19383
homeobox protein TGIF1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04350
TGF-beta signaling pathway
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04350 TGF-beta signaling pathway
111973366
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111973366
Transcription factors [BR:
salp03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain TALE
111973366
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Homeobox_KN
Homeodomain
Homez
Motif
Other DBs
NCBI-GeneID:
111973366
NCBI-ProteinID:
XP_023856478
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All DBs
Position
LG14:complement(50265722..50271367)
Genome browser
AA seq
314 aa
AA seq
DB search
MKTKKGMMTLSASETDEEDSMDAPLDLSSSTGGSSGKRKRRGNLPKESVQILRDWLYEHR
YNAYPSEQEKALLSKQTQLSTLQVCNWFINARRRLLPEMLRKDGKDPNQFTFSRKGSKGG
DGGFSDSSSQSPKHATAATGPEDSYDQRALHPSSFEAGLPSPSILLKAVSSPKMSPSSSP
GSDTTVAPRPSVICHTTVTTMAMQKQGSSPPSYLSCFLSSINTDGSRATELLHSTTEALG
LFRCREEGLGLGAPAVTTTHTTMECNLSPQSGLFNTPPPTPPDLTQDFSGFQLLVDVALK
RAAEMELQAKQLVS
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgaagacaaaaaagggcatgatgacgttgtcggccagtgagacggacgaggaggacagc
atggacgcccccctggacctgtcatccagtacgggaggtagcagtgggaagaggaagagg
cgcgggaacctacccaaggagtcagtgcagatcctcagggactggctatatgagcatcgc
tacaatgcctacccctctgaacaggagaaagccctgctctccaagcagacgcagctctcc
acactacaggtttgcaactggttcatcaacgcacgtcggcggctcctcccggagatgctg
cggaaagacggtaaagaccccaaccagttcaccttctcccggaaaggcagcaagggaggc
gacgggggcttctctgattccagctctcagtcaccaaagcacgccacagccgccacgggc
cccgaggacagctacgaccagcgggcgctgcacccctccagcttcgaggcaggtctcccc
agccccagcatcctgctgaaggccgtatcgtcccctaagatgtccccctcctcctccccg
gggtctgacaccaccgtggctccccggccctctgtcatctgtcacaccactgttaccacc
atggccatgcagaaacagggctctagccccccctcctacctctcctgcttcctctccagc
attaacacagatggtagtagggccacagagctgctgcattccaccacagaggctctgggg
ctcttcagatgccgggaggaagggttgggcctgggcgccccggcagtgaccaccacccac
accaccatggagtgtaacctaagcccccagagtgggctcttcaacacccctccccccacc
cccccagacctcacacaggacttcagtggcttccagctcctagtggatgtggccctcaag
cgggcggcagagatggagctccaggctaaacaactggtgtcttaa
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