Salvelinus sp. IW2-2015 (Arctic char): 111974756
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Entry
111974756 CDS
T05762
Name
(RefSeq) sodium channel protein type 2 subunit alpha-like isoform X1
KO
K04834
voltage-gated sodium channel type II alpha
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04040 Ion channels [BR:
salp04040
]
111974756
Ion channels [BR:
salp04040
]
Voltage-gated cation channels
Sodium channel, voltage-gated (Nav)
111974756
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ion_trans
Na_trans_assoc
PKD_channel
Na_trans_cytopl
GPHH
Zip
IQ
ATP-synt_B
Motif
Other DBs
NCBI-GeneID:
111974756
NCBI-ProteinID:
XP_023858509
LinkDB
All DBs
Position
LG2:13950067..14004500
Genome browser
AA seq
1752 aa
AA seq
DB search
MVIMLTILTNCAFMTLSQPPEWTKNVEYTFTGIYTFESLIKILARGFCVGKFTFLRDPWN
WLDFCVIVMAYVTEFVNLGNVSALRTFRVLRALKTISVIPGLKTIVGALIQSVKKLSDVL
ILTVFCLSVFALVGLQLFMGNLRNKCLRIPLNSTNVSDDSFDFNGTDLNKTSSFNWTYYM
NDPKNYYYLPGKKDALLCGNGSGAGLCPEGFWCIKAGRNPDYGYTSFDTFSWAFLSLFRL
MTQDYWENLYQQTLRAAGKPYMIFFVLVIFLGSFYLINLILAVVAMAYDEQNQATIEEAQ
QKEEEFQKLKRQQEDAQAAAAVTAAESGEFSERGELTDTSSEASKLSSKSAKERRNRRKK
KKQREEEEERGDNDKFHRSESEGSMQKSRFRFSIDASNLLNYDMRCSTPHQGNSTEPEYR
KARCESYQASMNFLEDPGARQRAFSVASVITNTMEELEESRQECPPCWYKFSNTFLIWDC
CPAWLRIKKTVKMIVMDPFVDLTITICIVLNTVFMAMEHHSMSGNFKKMLSVGNLVFTGI
FTAEMCFKIIALDPYCYFKEGWNIFDGIIVSLSLMEIGLANVSGMSVLRSFRLLRVFKLA
KSWPTLNMLIKIIGNSVGALGNLTLVLAIIVFIFAVVGMQLFGKNYRDCVCKISTDCTLP
RWHMHDFFHSFLIVFRVLCGEWIETMWDCMEVAGQSMCLIVFLMVMVIGNLVVLNLFLAL
LLSSFSADNLAATDDDSEMNNLTVAIGRIHQGIAFVKALVCHSFHSICLRKKKGSLNEDK
PLDDLHRSNYNSNHTTVEIMKDPEYVKDDNGTTGGVGMGMGSNAAGKYIVNDNTDYMQFI
HNPSLTVTVPIAVGESDFENLNTEDFSSDSSDIEGSKEQLAKDRPLSSSEGSTVDIRPPG
EREGSVDMEPEESMEAEGCFTDGCVRRFQCCQVNVEEGKWKMWWTLRKTCFRIVEHNWFE
SFIIFMILLSSGALAFEDIYIEQRKTIKTVLEFADKVFTYIFILEMLLKWVAYGFAKYFT
NAWCWLDFLIVDVSLVSLVANALGYAELSAIKSLRTLRALRPLRALSRFEGMRVVINALL
GAIPSIFNVLLVCLIFWLIFSIMGVNLFAGKYYHCINMTTRERFEVRDVANKTECLALKG
THWKNVKINFDNVGAGYLALLQVATFKGWMDIMYAAVDSRNLDDQPDYEVNLYMYLYFVV
FIIFGSFFTLNLFIGVIIDNFNQQKKKFGGQDIFMTEEQKKYYNAMKKLGSKKPQKPIPR
PVNKFQGFVFDFITKQAFDIVIMILICLNMVTMMVETDDQTDDIRKILYNINLVFIVMFT
GECILKMISLRQYYFTIGWNVFDFIVVILSIIGMFLSELIEKYLVSPTLFRVIRLARIGR
ILRLIKSAKGIRTLLFALMMSLPALFNIGLLLFLVMFIYAIFGMSNFAYVKKESGIDDMF
NFETFGNSMICLFQITTSGGWDGLLAPILNKGEPDCDSRKEHPGSTYKGGDCGNPTVAII
FFVSYIIICFLVVVNMYIAVILENFSVATEESAEPLSEDDFEMFYEVWEKFDARATQFME
YDKLSDFADALDPPLRISKPNKIQLISMDLPMVSGERIHCLDILFAFTKRVLGEGEGLDI
LRGQMEERFMASNPSKVSYEPITTTLRRKLEDMSALVIQRAFRRYLLKRIVKRASAMYKE
KIQSGGMLLDKEVLVIDKFNEISTSDRTDMTPSTASPPSYDSVTKPDKNKYEKDKRKKEV
KEKKKYMDVGKI
NT seq
5259 nt
NT seq
+upstream
nt +downstream
nt
atggtaatcatgttgacaatccttaccaactgtgcgtttatgaccctgagtcagcccccg
gaatggacaaagaatgtagagtacacattcactggaatctatacatttgaatctcttata
aaaattctggcaaggggcttctgtgtagggaagttcacctttctccgagacccatggaac
tggttggatttctgtgttattgtcatggcgtatgtaacagagtttgtaaacctaggcaat
gtttcagctcttcgcactttcagagtactaagagctttgaaaactatttcagttatccca
ggcctgaagaccattgtgggagcgctgatccagtcagtgaagaaactgtcagacgtgctg
atcctcactgtattctgcctaagtgtctttgccctagtagggctgcagctgttcatgggc
aatttaagaaacaaatgtttaaggatccctcttaactcaaccaacgtctctgatgattca
ttcgactttaatgggacggaccttaacaagaccagctcgttcaactggacctattacatg
aatgatcccaaaaattattactacctcccaggtaaaaaagatgctttgctttgtggaaat
ggcagtggtgccgggctgtgcccagagggattctggtgcatcaaagcgggccggaaccca
gattacggctacaccagctttgacacgttcagctgggccttcctgtctctgttcagattg
atgactcaggactactgggagaacctctaccagcagaccctgagggctgctgggaagcca
tacatgattttctttgtgttggtcatcttcctgggctccttctaccttatcaacctaatc
ctggctgtggttgccatggcctacgacgagcagaaccaggccaccattgaggaggctcag
cagaaggaggaggagtttcagaagctgaagagacagcaggaggacgcacaggcggcggca
gcggtgacagcggctgagagtggggagttcagtgagagaggggagctcactgacacctcc
tcagaggcctccaaactcagttccaagagcgccaaagagagacgcaacaggcgcaagaag
aaaaagcagagagaggaggaggaggagagaggggacaatgacaagtttcacaggtctgag
tctgagggcagtatgcaaaagagtcgtttccgcttctccatagatgcctccaacctgctc
aactacgacatgagatgttccacaccacaccagggcaacagtacggagccagagtacaga
aaggcccgatgtgaatcgtaccaggcctctatgaacttcctggaggacccaggggccagg
cagagggccttcagtgtagctagtgttataactaatactatggaagaacttgaagagtcg
agacaggagtgccctccttgctggtacaagttctccaacacctttctcatctgggactgt
tgtccggcatggctgaggatcaagaagacagtcaagatgattgtgatggacccgtttgta
gacctgactattaccatatgtattgttctgaacacagtgttcatggctatggagcaccac
tcaatgtctgggaatttcaaaaaaatgctttctgtgggaaacctggtgttcacaggtatc
ttcacagctgagatgtgtttcaagattatcgctttggatccgtactgttattttaaggaa
ggctggaatatatttgatggtatcattgtcagtttgagcttgatggagattggcttggcc
aacgtgtctggaatgtctgtcctcagatcattccgattgctgagagtattcaaactggcc
aagtcttggcccacactgaacatgttgatcaagatcattggtaactcagtgggggctctg
ggtaacctcaccctggtcctggccatcatcgtcttcatcttcgcggtggtgggcatgcag
ctgtttgggaagaactacagagactgtgtgtgtaagatctctacagactgcacactgccc
cgctggcacatgcatgacttcttccactccttcctgattgtgttccgggtgctgtgtggg
gagtggatcgagaccatgtgggactgtatggaggtggctggtcagagcatgtgtctcatc
gtcttcctgatggtcatggtcatcgggaacctagtggtcctgaatctgttcctggccttg
ctgctgagctcgttcagtgctgataacctggcggccacggacgatgacagcgagatgaac
aatctgacggtggccataggccgcatccaccagggcatcgcctttgtcaaggccttggtg
tgccactccttccacagcatctgtctgaggaaaaagaaggggagcctgaatgaggacaag
cccctggatgacctccacagaagcaactacaactccaaccacaccactgtggagatcatg
aaagaccctgaatacgtgaaggatgacaatggcaccaccggtggggtaggcatgggaatg
ggtagcaatgcagcagggaagtacatagtcaacgacaacactgactacatgcagttcatc
cacaaccccagtctgaccgtcacggtgcccatcgctgtgggggagtcggactttgaaaac
ctcaacactgaggacttcagcagcgattcctcggacatagagggaagcaaagagcagcta
gctaaagaccgtccgctgagctcatcagagggcagtacagtggacatcaggcccccagga
gagagagagggctcggtggacatggagcctgaggagtccatggaagctgaaggatgcttc
actgatggctgtgtccgtagattccaatgctgccaagtgaacgttgaggagggcaagtgg
aagatgtggtggacgttgaggaagacctgcttcagaatagtggagcacaactggtttgag
agctttatcatcttcatgatcctgctcagcagtggagcactggcatttgaggacatctac
atcgaacagaggaagaccattaaaacggtgttggagtttgcggacaaagtcttcacctac
atcttcatcctggagatgttgctgaaatgggtggcctatggattcgccaaatacttcacc
aacgcctggtgctggttggactttcttattgttgacgtctctttggtcagccttgtggcc
aacgccctgggctacgctgagctgagtgccatcaagtccctgaggacgctgcgagcgctg
aggcccctgagagcgctgtcccgcttcgagggcatgagggtggtcatcaacgctctgctt
ggagccatcccctccatcttcaatgtgctgctggtgtgcctcatcttctggctcatcttc
agcatcatgggtgtcaacctgtttgcagggaaatactaccattgtatcaacatgaccacg
agggagcgcttcgaagtcagagacgtggctaacaagacagaatgtttggctttgaaaggt
acccactggaagaatgtcaagatcaactttgataacgtgggagcaggctatctggcactg
ttacaagtggctacattcaaaggctggatggacatcatgtatgcagctgtggactctcgc
aatttggatgatcaacccgactacgaagtgaatctgtacatgtatctgtactttgtggta
ttcatcatatttggatccttcttcacactcaacctcttcattggtgtcattatagacaac
ttcaatcagcaaaagaaaaagtttggaggtcaagacatcttcatgacagaggaacagaag
aaatactacaatgctatgaagaagcttggctcaaagaaaccccaaaagcctatccctagg
ccagtgaacaagtttcaaggatttgtttttgatttcattacaaagcaagccttcgacatt
gtcatcatgattcttatatgccttaatatggtcaccatgatggtggagacggatgaccag
acagacgacattcgtaaaattctctacaatatcaacctggtgtttattgtcatgttcacc
ggagagtgtattctgaagatgatctcactccgacaatactactttaccattggttggaat
gtatttgactttatcgttgttatcctgtcaataattggtatgtttctctcagaactgata
gagaagtacttggtttcaccaaccttattccgagtcattcgactggcccgaattggccgt
atccttcgcctcatcaagagtgccaagggaatccgtacactcttgtttgcgttgatgatg
tcacttcctgcattgttcaacattggtcttctgctcttcttagtgatgtttatctatgca
atctttggcatgtcaaactttgcatacgtcaagaaggagtctgggattgacgacatgttc
aactttgagacgtttggcaacagcatgatctgcctgttccagatcaccacgtcagggggc
tgggacggcctgctggcccctatcctcaacaagggagagccagactgcgacagccggaaa
gagcacccaggaagcacgtacaaagggggagactgtggaaaccccactgtggccattatc
ttctttgtgagctacataatcatatgtttccttgttgtggtcaacatgtacattgctgtc
atcttagagaacttcagtgtggccactgaggagagcgctgagcccctgagcgaggatgac
tttgagatgttctacgaggtctgggagaagtttgatgcgcgggccacccagttcatggag
tatgacaagctgtcagactttgctgatgcgctagaccccccgctccgcatctctaagccc
aacaagatccagttgatctcaatggatttacccatggtgagtggggagcgcatccactgc
ctggacatcctgtttgccttcaccaaacgtgtcctgggcgagggcgaaggcttggacatc
ctccggggtcaaatggaggagcgctttatggcgtccaacccctccaaggtgtcctatgaa
ccaatcaccaccacactgcgccgcaagctagaggacatgtctgccctggtcatccagaga
gctttcagacgatatcttctcaagcgtattgttaagcgggcctctgccatgtacaaggag
aagatacaaagtggaggcatgctccttgataaagaggttctcgtcatagacaaatttaac
gagatctctacttcagacagaactgacatgacaccctccacagcttctcccccatcatat
gacagtgtcacaaaacctgataaaaacaaatatgaaaaagacaagagaaagaaggaggtg
aaggagaaaaaaaagtacatggatgtcgggaagatttag
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integrated database retrieval system
