Salvelinus sp. IW2-2015 (Arctic char): 111977168
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Entry
111977168 CDS
T05762
Name
(RefSeq) NSFL1 cofactor p47 isoform X1
KO
K14012
UBX domain-containing protein 1
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
111977168
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
salp04131
]
111977168
Membrane trafficking [BR:
salp04131
]
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SNARE associated proteins
Others
111977168
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Motif
Pfam:
SEP
UBX
UBA_4
Spt20_SEP
TAP_C
Motif
Other DBs
NCBI-GeneID:
111977168
NCBI-ProteinID:
XP_023862264
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Position
LG17:complement(1422247..1426393)
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AA seq
388 aa
AA seq
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MGSVLSLNGHIKMADQEVSVREFVAVTDVDEERARFFLESAGWDLQLALASFFEDGPEDD
IVTLPQPEIGGSSVPRPTGPRSEHRVTSFRDMMHEEVDDSDEEEGQRFFAGGSERSGQQI
VGPPKKKSSNEVVEDLFKGAKEHGAVPVEKAGRGPGEPSRARPFIGGGYRLGAAPEEEPV
YVAGERRAANSQQDKVHVVLKLWKTGFSLGDGELRNYSDPGNAIFLESIRRGEIPLELRQ
RSRGGQVNLDMEDHRDEDFSKPKVAFKAFGGEGQKLGSATPELVSAPCMGDRDQVASEAQ
AIASVNLDASKPVTNIQVRLADGGRLVQKFNHTHRVSDVRQFVVGARPLMAATEFVLMTT
FPNKELTDESQSLQDANLLNAVIVQRLK
NT seq
1167 nt
NT seq
+upstream
nt +downstream
nt
atgggttcggtgctgtcattgaatgggcatatcaaaatggcggaccaagaagtctcggtg
agggagttcgttgctgttacagatgttgatgaggagagggcccgttttttcttggagtct
gccggctgggatttgcagcttgccctggccagtttctttgaagatggtcctgaggatgac
atcgtgacacttcctcagccagagattggtggatcctctgtgcctcgtcctacagggccc
aggagtgaacatagggtgacctccttcagagatatgatgcatgaggaagtagatgacagt
gatgaggaggaagggcaaaggttctttgctgggggctctgaacgcagtgggcagcagata
gtgggaccccccaaaaagaagagctctaatgaggttgtggaggacctcttcaagggggct
aaggagcatggggctgtacccgtggagaaggctgggaggggcccaggagagcctagtcga
gccaggccttttattggtggtggctaccggcttggtgcagcgcctgaggaggagcctgtt
tacgtggctggggagagaagagcagctaacagccagcaggataaggtgcatgtagtcctg
aagctgtggaagacgggtttcagcctgggcgacggtgaactcagaaactacagcgaccct
ggcaacgccatcttcctggagtctatccgcaggggggagattcctttggagttgaggcag
cgttcccgagggggtcaggtcaacttggatatggaggaccatcgggatgaggacttctcc
aaacccaaggttgccttcaaggcattcggtggggaaggacagaaactgggcagtgctacc
cctgagctggtgtctgctccgtgtatgggggaccgggaccaggtagccagtgaggcccag
gcaatcgcctctgtaaacctggacgcctccaagcctgtgaccaacatccaggtcagactg
gccgacggggggagactggtgcagaagttcaaccacactcacagggtgtcagacgtgcgt
cagtttgtggtgggagctcgccctttgatggcggcgacagagtttgtgctcatgacaacc
ttccccaacaaggagcttactgacgagagccagtcgctgcaggatgccaacctgctcaac
gcagtcattgtgcagcggctaaagtga
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