Salvelinus sp. IW2-2015 (Arctic char): 111979956
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Entry
111979956 CDS
T05762
Name
(RefSeq) lymphoid enhancer-binding factor 1
KO
K02620
transcription factor 7
Organism
salp
Salvelinus sp. IW2-2015 (Arctic char)
Pathway
salp04310
Wnt signaling pathway
salp04520
Adherens junction
salp04916
Melanogenesis
salp05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
salp00001
]
09130 Environmental Information Processing
09132 Signal transduction
04310 Wnt signaling pathway
111979956
09140 Cellular Processes
09144 Cellular community - eukaryotes
04520 Adherens junction
111979956
09150 Organismal Systems
09152 Endocrine system
04916 Melanogenesis
111979956
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
111979956
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
salp03000
]
111979956
Transcription factors [BR:
salp03000
]
Eukaryotic type
beta-Scaffold factors with minor groove contacts
HMG TCF-1
111979956
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CTNNB1_binding
HMG_box
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
111979956
NCBI-ProteinID:
XP_023866419
LinkDB
All DBs
Position
LG20:25963335..26029788
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AA seq
498 aa
AA seq
DB search
MPQLSSGGGDDLGANDEMISFKDEGDQDEKIQENAFTERDLADLKSSLVNESETNQSPNA
AAVRRGQQNEHRGYQEKHREHLDGVSKHQDGGMYKTAYPGYPFLMLPDPYIPNGSVSPSS
NKVSVVQQSHGMHPLTSLLPYSNDHFNPSPPHLPTDMSQKGVHRHQSQDISGFYSLYSGR
VGTDAPSMGWQSQPVYPLSSCGFRQPYSSSLPNSSSYPRFSHSLMLGPGMHSTGIPHPAI
VPPSGKQDHHDHYDRNMYAKPHQEPKREKEPKKPVIKKPLNAFMLYMKEMRAKVIAECTL
KESAAINQILGRRVSMDTLLTREEQAKYYELARKERQLHMQLYPSWSARDNYGKKKRRKR
EKQQDSTTDPGSPKKCRARFGLNQQTDWCGPCRRKKKCVRYLQGGWCASPTSSDGSAIDS
PPSPVDGVPPQHPSLPSSPSPASPLHIPLHPQPSKQHTPLILSKPKTTELSLKALIESSQ
QHDNLSHHHHDCTLPKSH
NT seq
1497 nt
NT seq
+upstream
nt +downstream
nt
atgcctcagctcagtagcggcggaggagatgatcttggagcgaacgatgaaatgatatcc
tttaaggatgaaggcgaccaagatgagaaaattcaagaaaacgctttcacagaaagggac
ttagctgacctcaaatcgtctctggtgaatgaatccgagacgaatcaaagtccgaacgca
gcggcggtcagacggggacagcaaaacgaacacagaggttatcaagagaaacaccgggag
catcttgacggcgtttccaaacatcaagatggaggaatgtataaaacagcgtatccgggg
tacccgtttctcatgctgcctgacccatacatccccaacggatcagtgtcaccatcttcc
aacaaagtttcggtggtccagcagtctcacgggatgcaccctctgacgtccctgttgccg
tacagcaacgaccacttcaaccccagcccccctcacctgcccacagacatgagccagaaa
ggcgttcacaggcaccagtcccaggacatctcaggcttctactccttatactcagggcgt
gttgggacagatgccccctccatgggctggcaaagtcagcctgtctatcccctgtcctca
tgtggattcagacagccctactcctccagtctccccaacagctcttcctaccccaggttc
tctcactctctgatgctagggccaggcatgcactcaacggggatcccccatccagccatc
gtgccaccttcaggcaaacaggaccatcatgaccattacgacaggaacatgtacgctaag
ccacaccaggagcccaagcgggagaaggagcctaagaagccagtgatcaagaagcctctg
aatgctttcatgctgtacatgaaggagatgagggccaaggtgatcgctgagtgcacgctg
aaggagagcgctgcaatcaaccagatacttggcagaagggtgagcatggacacgcttctg
acccgggaggaacaggccaaatactatgagctggccaggaaggagcggcagctacacatg
caactctaccccagctggtccgccagagacaactacggcaagaagaagagaagaaaaaga
gagaagcagcaggactccaccacagaccctggctctcctaagaaatgcagagctcgcttc
ggcctcaaccaacaaacggactggtgtggtccctgcaggaggaaaaagaagtgcgttcga
taccttcaaggaggatggtgcgccagccccacttcttccgatggaagcgctatagactcg
cccccctcccccgtcgacggcgtcccccctcagcacccctccctgcccagctcgccctcg
cctgcttcccccttacacatccctctgcacccccagcccagcaaacaacacacgcccctt
atcctctcaaaacccaagaccacggaactttctctcaaagctttaatagaatcatcccaa
cagcacgacaatctcagtcatcatcatcatgactgtaccctgcccaagtctcactag
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