Candidatus Syntrophocurvum alkaliphilum: SYNTR_2166
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Entry
SYNTR_2166 CDS
T06326
Name
(GenBank) RNA polymerase sporulation specific sigma factor SigH
KO
K27000
RNA polymerase sigma-H factor
Organism
salq
Candidatus Syntrophocurvum alkaliphilum
Brite
KEGG Orthology (KO) [BR:
salq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
salq03021
]
SYNTR_2166
Transcription machinery [BR:
salq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SYNTR_2166
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
HTH_16
GerE
HTH_38
HTH_23
HTH_30
HTH_28
HTH_29
DUF1676
Motif
Other DBs
NCBI-ProteinID:
QGU00760
UniProt:
A0A6I6DLU7
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All DBs
Position
2228503..2229153
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AA seq
216 aa
AA seq
DB search
MPNSIAAKQIYLVYVEMSDEEIVELAQQGDQYAIEYLVDKYKNFVRAKARSYFLIGADKE
DIIQEGMIGLFKAIRDYKVDKLTSFRAFAELCITRQIITAIKTATRQKHIPLNSYVSLNK
PIYDEESDRTLMDILSTNKITNPEEIIISREEFVFIEKKMGEILSSLEWKVLMAYLEGKS
YQEIAVELKRHVKSIDNALQRVKRKLEKYLEDRNEI
NT seq
651 nt
NT seq
+upstream
nt +downstream
nt
atgccaaattccatcgctgcaaaacaaatctatcttgtatatgtcgaaatgtctgatgaa
gaaatagttgaactagcgcagcaaggtgatcagtatgcaatagaatatttagttgataaa
tataaaaactttgttagagcaaaagctagatcttattttcttatcggtgctgataaagaa
gacattattcaagaaggcatgataggtctttttaaggcaattcgtgattataaggtggac
aaacttacctcatttagagcgtttgcagagttgtgtattactagacaaatcattacagca
ataaaaactgcgactcgccaaaaacatattccacttaactcatatgtatcattaaataaa
cctatctatgatgaagaatctgatagaacattaatggatatactttctactaataaaatt
actaatcctgaagaaataattattagtagagaagaatttgtgttcattgaaaaaaagatg
ggtgagatactaagttcactagagtggaaagtacttatggcgtatttggaaggtaagtct
taccaagaaattgctgttgaattaaaaaggcatgttaagtctattgataatgccttacaa
agagtaaaaaggaagcttgaaaagtacttagaagatagaaatgagatttag
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