Salinivibrio sp. YCSC6: E8E00_03050
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Entry
E8E00_03050 CDS
T05946
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K10943
two-component system, response regulator FlrC
Organism
saly
Salinivibrio sp. YCSC6
Pathway
saly02020
Two-component system
saly02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
saly00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
E8E00_03050
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
E8E00_03050
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
saly02022
]
E8E00_03050
02035 Bacterial motility proteins [BR:
saly02035
]
E8E00_03050
Two-component system [BR:
saly02022
]
Other families
FlrB-FlrC (polar flagellar synthesis)
E8E00_03050
Bacterial motility proteins [BR:
saly02035
]
Flagellar system
Flagellar assembly proteins
Others
E8E00_03050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
AAA_5
AAA_2
HTH_30
HTH_20
Mg_chelatase
MerR
HTH_24
HTH_28
AAA_19
FleQ
AAA
AAA_7
AAA_16
MCM
HTH_23
Sigma70_r4_2
AAA_3
HTH_11
HTH_17
HTH_5
HTH_10
P-loop_TraG
MFD_D3
GerE
HTH_Crp_2
Motif
Other DBs
NCBI-ProteinID:
QCF35235
LinkDB
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Position
I:693721..695124
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AA seq
467 aa
AA seq
DB search
MSQTTVLIVEDDEGLREALVDTLALAGYHWIEADSAEQALLTLKSEAVDIVVSDVQMAGM
DGLALLRTIKNNTPNLPVLLMTAYANIEDAVAAMKEGAIDYMAKPFAPEVLLNMVSRYAP
VKADSSDAIVADPKSVALMALADKVAATDANVMILGPSGSGKEVMARYIHDHSVRVAAPF
VAINCAAIPENMLEATLFGYEKGAFTGAVQACPGKFEQAQGGTILLDEISEMDLGLQAKL
LRVLQEREVERLGGRKSIQLDVRVLATSNRDLKEYVAEGHFREDLYYRLNVFPITWPALT
DRPGDIIPLASHLLSRHCQKQGMPCPTLSQDAEQKLLHYPWPGNVRELDNVMQRALILAS
NACIQASDILLEGHDWHDASGLQHRVMDSQPVAPSVATPAASFSDPTINGSAGLGNELRD
QEFAIILDTIRACEGRRKEVAERLGISPRTLRYKLAKMRDAGIEIPS
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atgagccaaacaactgtcctgatcgtcgaagatgacgaaggtttgcgtgaggccctcgtc
gatacgcttgcccttgccggatatcactggatcgaggctgatagtgccgagcaagccttg
ctgaccttaaaatcagaggcggtcgatattgtcgtttccgatgttcaaatggccggaatg
gacgggctcgctttgctgcgaaccatcaaaaataacaccccgaatttaccggtgttattg
atgacagcctacgccaacattgaagatgcagtggccgcgatgaaagaaggggcgattgac
tatatggccaagccgttcgcgcctgaagtgctactcaacatggtcagccgttatgctccg
gttaaagcagacagctcggacgccattgtcgcggatcctaaaagtgtcgcattgatggcg
ttggccgacaaagtggccgcgaccgatgccaatgtgatgatcttagggccgtcaggctcg
ggtaaagaagtgatggcgcgatatatccacgatcattctgtgcgcgtggcggcgcctttt
gtcgcgattaactgcgcggccattccagaaaacatgctggaagcgacactgtttggttac
gagaaaggtgcatttactggcgccgtacaagcttgcccagggaaatttgagcaagctcaa
ggtggcaccattttgctggatgaaattagcgaaatggacttgggtctccaagctaagtta
ttgcgggtacttcaagagcgtgaagttgaacgcttagggggccgtaaaagcattcaattg
gatgttcgcgtacttgccaccagtaaccgcgatctcaaagagtatgtggccgaagggcat
ttccgagaagatctgtattatcggttaaacgtctttcctattacctggcctgcgctcaca
gacaggcccggtgatattatcccactggcgagtcatttgttgtcacgccactgtcaaaaa
caaggcatgccgtgccctacattaagtcaagatgcagagcagaagctcctccactatcca
tggcccggcaacgtccgtgagctcgacaacgtgatgcagcgcgctctgattctggcgagc
aatgcctgcattcaagcgagtgatattttgctagagggccatgattggcatgatgcctct
ggcttacagcatcgagtgatggatagccagccggtggcaccatcggttgcaacgccagcg
gcatccttttccgatccaacgataaacggtagtgctggattggggaatgagctgcgggat
caagagtttgctatcattctagatactattcgtgcctgtgaaggacgccgcaaagaagtg
gctgagcggttagggatcagcccgcgaacattgcgttataaattagccaaaatgcgtgat
gctgggattgaaattccaagctaa
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