Streptomyces ambofaciens: SAM23877_0849
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Entry
SAM23877_0849 CDS
T04055
Name
(GenBank) putative DNA-binding protein
Organism
samb
Streptomyces ambofaciens
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_30
HTH_8
HTH_20
HTH_23
HTH_17
HTH_10
HTH_1
Sigma70_r4_2
HTH_11
Sigma70_r4
HTH_AsnC-type
Motif
Other DBs
NCBI-ProteinID:
AKZ53898
UniProt:
A3KJ67
LinkDB
All DBs
Position
complement(828889..830421)
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AA seq
510 aa
AA seq
DB search
MAGREDGTRQRDAGAGEQVEWAAELLDHLRPAGRDVRRVVTWLAGAAEATVTLRDGTGRL
LAGTRAPLDDGLLADLTSGRIASAALEDGDRHLRLVRVERVHPAPAAVLAVARERPFDRR
SADIVTHTAQVVELLLAGHESAAAGHRLRRATSDLRLAILQLLMVEDTVSARRVAAGLWP
GLLDTDTACVYVVESSPEERDRLAEQCLSVTEDRALVVRCPAMDGHVIVLTPRAAAGRQL
RSLVGRTPGVFLGGSARQSLVRTATAYGQAVSALAVARFRPEKAAVYAERTHPERLMDPA
ELHGWTAHVLRPLDALPHHTRAELLATTRLGLEFTAVAAAKILGVSRNTVRARMERVEAL
LRTDFTDLSARATVHLALNAQVGLDQRLADGGAESPAPVRLTDLLAGPALRGWAGDLLGR
LEPDTRRLRRTLRTWLAVGANAERAAQTLGVHPQTVREHVRSAEPVLERQLLAAGSDLYE
VVLAHLAAGDLDQPLLHGTKPGHPDSPVHG
NT seq
1533 nt
NT seq
+upstream
nt +downstream
nt
gtggcgggccgcgaggacgggacacggcagcgggatgccggggccggtgagcaggtggag
tgggcggcggagctgctcgaccacctgcggccggccggacgcgacgtacgcagggtcgtg
acctggctcgccggggccgcggaggcgacggtgacgctgcgggacggcaccggccgcctg
ctggccggcacccgggctccgctggacgacggtctgctcgccgacctcacctcgggccgg
atagcctccgccgccctggaggatggggaccggcatctgcggctcgtccgtgtcgagcgg
gtccacccggcaccggccgccgtcctcgcggtcgcccgcgagaggccgttcgaccggcgg
tccgccgacatcgtcacgcacaccgcccaggtggtggagctgctgctggcgggccacgag
tcggccgcggccggccaccggctgcggcgggcgacgtccgacctccgcctggccatcctg
caactgctcatggtcgaggacaccgtctccgcccggcgcgtggccgccgggctgtggccg
ggtctgctcgacaccgacacggcgtgcgtgtacgtcgtggagagcagccccgaggagcgc
gaccgcctcgccgagcagtgcctgtcggtgacggaggaccgggcgctggtcgtacggtgc
ccggccatggacggccacgtcatcgtcctcacgccccgcgcagcggccggccggcagctg
cgctcgctcgtcggccgcacccccggcgtcttcctgggcggcagcgcacggcagagcctc
gtgcgcaccgccaccgcctacggacaggccgtgagcgcgcttgccgtcgcccggttccgc
cccgagaaggcggcggtgtacgccgagcggacccaccccgagcgcctgatggacccggcg
gagctgcacggctggacggcccacgtgctgcgcccgctcgacgccctgccgcaccacacc
cgtgccgaactgctcgccaccacccgcctgggcctggagttcaccgccgtcgccgcggcg
aagatcctcggggtcagccgcaacacggtccgcgcccgcatggagcgggtcgaggcgctg
ctgcgcaccgacttcaccgacctgagcgcccgcgcgaccgtccacctcgccctgaacgcc
caggtgggactggaccagcgcctcgccgacggcggcgccgagagccccgcccccgtgcgt
ctgaccgacctgctggccgggcccgcgctgcgcggctgggccggcgacctgctcggccgt
ctggagccggacacccggcggctgcggcgcaccctgcgcacctggctcgccgtcggcgcc
aacgccgagcgggccgcgcagaccctgggggtgcatccccagaccgtgcgcgagcacgtc
cgcagcgccgagcccgtcctcgaacgccagctgctcgccgccggcagcgacctgtacgag
gtggtgctcgcccacctcgcggcgggcgacctcgaccagcccctcctgcacgggacgaaa
ccgggccatccggactcacctgtgcacgggtga
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