Streptomyces ambofaciens: SAM23877_1407
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Entry
SAM23877_1407 CDS
T04055
Symbol
ung
Name
(GenBank) uracil-DNA-glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
samb
Streptomyces ambofaciens
Pathway
samb03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
samb00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SAM23877_1407 (ung)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
samb03400
]
SAM23877_1407 (ung)
Enzymes [BR:
samb01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
SAM23877_1407 (ung)
DNA repair and recombination proteins [BR:
samb03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SAM23877_1407 (ung)
Prokaryotic type
SAM23877_1407 (ung)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AKZ54456
UniProt:
A3KKQ8
LinkDB
All DBs
Position
complement(1430508..1431191)
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AA seq
227 aa
AA seq
DB search
MTDIAMLPESWREVLGGELQQPYFKELVEFVEEERANGPVYPPREEVFAALQATPYDRVK
VLVLGQDPYHGEGQGHGLCFSVRPGVKVPPSLRNIYKEMHAELDTPIPDNGYLMPWAKQG
VLLLNAVLTVRAGEANSHKARGWELFTDAVIRAVADRTDPAVFVLWGNYAQKKLPLIDET
RHVVVKGAHPSPLSAKKFFGSRPFTQINEAVAKQGHEPIDWTIPNLG
NT seq
684 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacatcgccatgctgcccgagtcctggcgcgaggtgctggggggcgagctgcag
cagccctacttcaaggagctggtggagttcgtcgaggaggagcgggcgaacggccccgtg
taccccccgcgcgaggaggtcttcgccgctcttcaggccacgccgtacgaccgggtgaag
gtgctggtcctcggccaggacccgtaccacggcgaggggcagggccacggcctgtgcttc
tcggtccggccgggggtgaaggtaccgccctccctgcggaacatctacaaggagatgcac
gccgagctggacaccccgatcccggacaacggctatctcatgccctgggcgaagcagggc
gtcctgctgctcaacgcggtgctcacggtgcgcgccggcgaggcgaactcgcacaaggcc
cgcggctgggagctgttcaccgacgcggtgatccgcgcggtggccgaccggaccgacccg
gcggtgttcgtgctgtggggcaactacgcgcagaagaagctgccgctgatcgacgagacg
cggcacgtggtcgtcaagggcgcgcacccctcgccgctgtcggcgaagaagttcttcggt
tcccgtccgttcacgcagatcaacgaggcggtggcgaagcagggccacgagccgatcgac
tggaccatcccgaacctgggctga
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