Sinorhizobium americanum: SAMCFNEI73_Ch2068
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Entry
SAMCFNEI73_Ch2068 CDS
T04621
Name
(GenBank) transcriptional regulator NgrR, LuxR family
KO
K19733
LuxR family transcriptional regulator, quorum-sensing system regulator SinR
Organism
same
Sinorhizobium americanum
Pathway
same02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
same00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
SAMCFNEI73_Ch2068
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
same03000
]
SAMCFNEI73_Ch2068
Transcription factors [BR:
same03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
SAMCFNEI73_Ch2068
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Autoind_bind
Sigma70_r4_2
Sigma70_r4
HTH_23
HTH_28
HTH_10
HTH_38
Motif
Other DBs
NCBI-ProteinID:
APG91354
UniProt:
A0A1L3LMQ4
LinkDB
All DBs
Position
2060079..2060813
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AA seq
244 aa
AA seq
DB search
MTNQQAVLDLLDIVEYGGCAEPQQFFALMRRTFDIAHLLYLEAEPTAEGLKVCRLHHTFG
AYAEELYLSRGLHRIDPILRLALGGVRPVEWAPARRRFPECEPLFEAAEDIGLSTEGVAL
PLPSPAGRMALLAISANMSPTEWSEYRRCHLRDFQLAANLFHASMLERAMADAIDERDTR
LTSRETEVLTWSAAGKSYWEIATILGISERTVRFFMSNARRKLNVVSNTQAVAQAVRHAL
IPTI
NT seq
735 nt
NT seq
+upstream
nt +downstream
nt
atgactaatcaacaggctgtcctcgatctgctggatatcgtggaatatggcgggtgtgcg
gaaccgcagcaattcttcgccttgatgcgacgcaccttcgatattgcgcatcttctctat
ctcgaagcggaaccgaccgccgagggtctcaaggtctgccgcctgcatcacaccttcggc
gcctatgccgaggaactgtatctgtcgcgcggtcttcaccggatcgatccgattcttcgg
ctggccctcgggggcgtgaggcctgtggaatgggcgcccgcacgccgccgctttcccgaa
tgcgagccgctcttcgaggctgcggaggacatcggcctgtccacggaaggcgtcgccctg
ccgctgccctcgccggccggccgcatggcgctgctggcgatcagcgccaacatgtcgccg
acggaatggtccgaatatcgtcgctgccatctgcgcgacttccagctggcggccaatctt
tttcatgcctcgatgctcgagcgggcgatggcggatgcgatcgacgagcgcgatacgcga
ttgaccagccgcgaaaccgaggtcttgacctggtcggcggccggcaagagctattgggaa
atcgccacgatcctcggcatttccgaacgcacggtccgcttcttcatgagcaatgcgcgg
cgcaagctcaatgtcgtgtcaaacacgcaagcggttgcgcaggcggtccgccatgcgttg
atccccaccatctga
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