Sandaracinus amylolyticus: DB32_003343
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Entry
DB32_003343 CDS
T03935
Name
(GenBank) Ribosomal large subunit pseudouridine synthase B
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
samy
Sandaracinus amylolyticus
Brite
KEGG Orthology (KO) [BR:
samy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
samy03009
]
DB32_003343
Enzymes [BR:
samy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
DB32_003343
Ribosome biogenesis [BR:
samy03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
DB32_003343
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
AKF06194
UniProt:
A0A0F6SF23
LinkDB
All DBs
Position
3828317..3829369
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AA seq
350 aa
AA seq
DB search
MARERLQKILAHAGVASRRAAEGLIASGHVRVNGRVVTEIGSSADPRKDKIEVDGKRVVL
EKPAYFVLHKPRGVVSTLSDPEGRPHLGQYLAQLGARVYPVGRLDFHTSGVLLVTNDGEL
TDALLHPRKDVPKIYVAKLRGHVQVEDLDRLRNGVVLDDGHKTKPAEVFVLREEDRNTWV
QITLYEGKNRQIHRMGDAIGHPVLRLARVSFAGVTAEGLRPGQWRELDARELEKLKKQYI
TPARRARDRAGSIESVPDEREAPAKPRARGGASEAPAKPRARGGASKAAAKPSGAKRGAG
PMRARADEGAKRERGAASASRGKSARARGDEGASSERATSKRSRLTPRGR
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggctcgagagagactccagaagatcctcgcgcacgcgggggtcgcgtcccgtcgtgcg
gccgaagggctgatcgcgtcggggcacgttcgcgtgaacgggcgcgtggtcaccgagatc
ggcagcagcgccgatccgcggaaggacaagatcgaggtcgacggcaagcgcgtcgtcctc
gagaagcccgcgtacttcgtgctgcacaagccgcgcggggtcgtgagcacgctgagcgat
cccgagggacggccgcacctcggtcagtacctcgcgcagctcggcgcgcgcgtgtacccg
gtcgggcgtctcgacttccacacgagcggcgtgctgctcgtgacgaacgacggcgagctc
acggacgcgctgctccatccgcgcaaggacgtgccgaagatctacgtcgcgaagctgcgc
gggcacgtgcaggtcgaggatctcgatcggctgcgcaacggcgtggtgctcgacgacggg
cacaagacgaagcccgccgaggtgttcgtgctgcgcgaggaggaccgcaacacgtgggtc
cagatcacgctgtacgaggggaagaaccggcagatccaccgcatgggcgatgcgatcggg
catccggtgctgcgcctcgcgcgcgtgtcgttcgcgggggtgaccgcggaagggctgcgg
ccgggccagtggcgcgagctggacgcgcgcgagctcgagaagctgaagaagcagtacatc
acgccggcgcgccgcgcgcgtgatcgcgcgggctcgatcgagagcgtccctgacgagcgc
gaggcgccggcgaagccgcgcgcgcgtggtggcgcgagcgaggcgccggcgaagccgcgc
gcgcgtggtggtgcgagcaaggcggcagcgaagccgagcggcgcgaagcgcggcgcagga
ccgatgcgtgcgcgcgcggacgagggcgcgaagcgggagcgcggagcggcgagcgcgagt
cgcgggaagagcgcgcgtgcgcgcggtgacgagggcgcatcgagcgagcgcgcgacgagc
aagcgatcgcgcttgacgcctcgtgggcgctga
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