Sinocyclocheilus anshuiensis: 107657194
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Entry
107657194 CDS
T04917
Symbol
ddx46
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
107657194 (ddx46)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sanh03041
]
107657194 (ddx46)
Enzymes [BR:
sanh01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
107657194 (ddx46)
Spliceosome [BR:
sanh03041
]
Complex A
U2 snRNP components
U2 related factors
107657194 (ddx46)
Complex B
107657194 (ddx46)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
PMI_typeI_cat
CdAMP_rec
Motif
Other DBs
NCBI-GeneID:
107657194
NCBI-ProteinID:
XP_016300705
LinkDB
All DBs
Position
Unknown
AA seq
934 aa
AA seq
DB search
MFGRHCDETMGRESRHYRKRSSSKGRSGSRSKSRSPDSKRSKKEEQTGSRTRERSRRERS
RRSRSRERKRPRRSRSRDRRRSRSRERRSQGRSKEKSENAELSADKKKIKEEKEEEKAED
QDFDQNTLEEEMRKRKERVEKWREEQRKKAMENIGELKKELEEMKQGKKWSLEDDDGQRA
FTHSDKLTDMHHTVRKVLRALMPCLSVVHTTKKKGELMENDQDAMEYSSEEEEVDLQTAL
TGFQTKQRKVLEPVDHQKIEYESFRKNFYVEVPELFRMSPEEVNEYRLELEGITVKGKGC
PKPIKTWVQCGISMKVLNAMKKHNYEKPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFL
LPMFRHILDQRPLGEAEGPIEWAEIIVCTPGRMIDMLGANNGRVTNLRRVTYVVMDEADR
MFDMGFEPQVMRIVDNVRPDRQTVMFSATFPRTMEALARRILSKPIEVQVGGRSVGCSDV
EQHVIVIAEEKKFLKLLEILGHYQEKGSVIIFMDKQEHADGLLKDLMKASYPCMSLHGGI
DQYDRDSIINDFKNGACRLLVATSVAARGLDVKQLILVINYSCPNHYEDYVHRAGRTGRA
GNKGYAYTFITEEQARYSGDIIKALELSGSAVPPELELLWTNFKEQQKAEGKSIKSSSGF
SGKGFKFDETEHALANERKKLQKAALGLHDSDDEDAALDIDEQIESMFNSKKRVKDLSAP
GGSAGAAAVGVSGSVTAVSGLSAPSAGNIQKLEIAKKLALKIQVQKNLGAEAQDVMQQAT
NAILRGGTMIAPSVSAKTIAEQQAEKINAKLNYTPVEKLEEERQATEATDTVKRYEEELE
INDFPQTARWKVTSKEALQRIGEYSEAAITIRGTYFPPGKEPKEGERKIYLAIESANELA
VQKAKAEITRLIKEELIRLQNSYQPTSKSRYKVL
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atgtttgggcgacactgcgacgaaaccatggggcgagagtcacggcattacaggaagcgc
tccagctcgaagggccggtccggcagcaggtctaagagccggtcgccagactccaagcgc
tctaagaaggaggagcagacgggatcccgcacccgcgagcgcagccgcagagagaggtca
cgcaggtcacgctccagagaacgcaagagaccgaggcgctccaggagtcgagacaggaga
cgctcacgcagccgagagcgcaggagccaagggaggagcaaggagaagtctgagaacgca
gagctgtccgctgacaagaagaagatcaaggaggagaaggaggaggagaaggctgaagat
caggactttgaccagaacactctggaggaggagatgaggaagaggaaggagcgagtggag
aagtggagggaggagcagaggaagaaagccatggagaacatcggagaactcaagaaggag
ctggaggagatgaagcaggggaagaagtggagtctggaggacgatgacggtcagagagcc
ttcactcattcagacaaactaactgatatgcatcacactgttaggaaagtcttgagagct
ctgatgccgtgtctgtctgtggtgcacaccaccaagaagaaaggagagctgatggagaat
gaccaggacgccatggagtattcatcagaggaagaggaagtggacttgcagacggccctc
acaggctttcagaccaaacagaggaaagttctggagccggttgatcatcagaagatcgag
tacgaatccttccgcaagaacttctatgtggaggtgccagagctgtttaggatgagccct
gaagaggtgaacgagtaccgtctggagctggagggaatcactgtcaaaggcaaaggctgt
ccgaagcccatcaagacgtgggtgcagtgtgggatatccatgaaagtgctgaacgcaatg
aagaaacacaactatgagaagccgaccccgatccaggcccaggccatcccagccatcatg
tcgggacgcgacctcatcggcatcgctaaaacaggaagtggaaagaccatcgccttcctg
ctgcccatgtttcgccacatcttagaccagcggccgctgggagaggcagaaggacccatc
gaatgggcagagatcatcgtgtgcactccgggacgcatgatcgacatgctcggtgctaac
aacggtcgcgtgactaatctgcgcagggtcacgtatgtggtgatggacgaggccgaccgg
atgttcgacatgggctttgagccgcaggtgatgcgtatcgtggataacgtgcggcccgac
cgtcagaccgtcatgttctcggctacgttcccgcgcacgatggaggctctggcgcgcagg
atcctgtccaaacccatcgaggtgcaggtgggaggcaggagcgtggggtgctcagacgtg
gagcagcacgtgattgtgatcgcggaggagaagaagttcctgaagctgctggagattctg
ggtcactatcaggagaagggctccgtcatcatcttcatggacaaacaggagcacgccgac
ggcctcctcaaagacctgatgaaggcctcgtacccctgcatgtctcttcacggaggcatc
gatcagtacgacagggacagcatcatcaatgacttcaagaacggcgcgtgtcgtctgctg
gtggccacctcggtggcggctcgaggcctggatgtcaagcagctcatcctggtgattaac
tacagctgtcccaaccactatgaggactacgtgcaccgcgccggacgcacaggacgggcc
gggaacaagggttacgcgtacaccttcatcactgaggaacaggcccggtactccggagac
atcatcaaagcgctggagctgtccggatcggccgtgccgccggagctcgagctgctctgg
accaacttcaaagagcagcagaaagccgaggggaagagcatcaagagcagcagcggattc
tccgggaagggctttaagttcgatgagactgagcatgcgctggctaacgagaggaagaag
ctgcagaaggctgcgttaggcctgcatgactctgatgatgaggatgcggctctggacatc
gacgagcagatcgagagcatgtttaactctaagaagcgtgtgaaggatctctctgctccg
ggtggctctgcgggagccgctgctgtcggtgtgagcggatctgtgaccgctgtgtccggt
ctgagcgctccgtccgccggaaacatccagaaactggagatcgccaagaaactggccctc
aagatccaggtgcagaagaacctcggcgcagaggctcaggatgtgatgcagcaggccaca
aacgccatcctgcgcggcgggacgatgatcgcaccctccgtctcggccaagaccatcgcg
gagcagcaggcggagaagatcaacgccaaactgaactacactccggtggagaagctggag
gaggagcggcaggccaccgaggccacggacaccgtcaagagatacgaggaggagctggag
atcaacgacttccctcagacggcgaggtggaaggtgacgtcgaaggaggctcttcagcgc
atcggcgagtattccgaggcagccatcactatccgaggaacatatttcccgccgggcaaa
gagcccaaagagggagagcgcaagatctacctggccatcgagagtgccaatgagctggct
gtgcagaaggccaaagcagaaatcacacggctgatcaaagaggagctgatccgtctgcaa
aactcgtaccagcccaccagcaaaagcagatacaaggttttgtag
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