Sinocyclocheilus anshuiensis: 107667450
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Entry
107667450 CDS
T04917
Name
(RefSeq) DNA-directed RNA polymerase I subunit RPA1-like
KO
K02999
DNA-directed RNA polymerase I subunit RPA1 [EC:
2.7.7.6
]
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
107667450
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sanh03021
]
107667450
Enzymes [BR:
sanh01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
107667450
Transcription machinery [BR:
sanh03021
]
Eukaryotic type
RNA polymerase I system
RNA polymerase I
Core subunits
107667450
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_3
RNA_pol_Rpb1_1
RNA_pol_Rpb1_4
TssR_VWA
HMG_box_2
Motif
Other DBs
NCBI-GeneID:
107667450
NCBI-ProteinID:
XP_016314604
LinkDB
All DBs
Position
Unknown
AA seq
1584 aa
AA seq
DB search
MLFSKETPWRRLEGMSFGLFSADEIRKLSVKSITNSQLLDNVGNAAANGLYDLALGPADN
KEICSTCMQDYTSCPGHFGLVDLPLPVYNPMFFDKLYLLIRGSCLGCHMLKCPRAAVHLL
LGQLKLLDVGAMKEVYELENVLSQLVEVNAKPSGIEIQEALEAFITPILKASDDKQHTAP
IKHICEKKSSLINSFWRVYMGPRKCPNCRASRVTVRREHNSKLIIIHGSSTASTEKDDDS
LITKRGFLTPSLLREHVIKLWEKEGFFLKHLFSGFDMNNSEKGFSPEVFFLELLVVPPCR
YRPVNRLGDQMFTNGQTVNLQAVLKDNFIIQKLLALIADEKTNATEDTQTEMEQSSESTE
ISQKDQTFLTGIQGLTLTDKLYNMWVRLQSHVNIVFDSDMDKLMTEKFPGIRQLLEKKEG
LFRKHMMGKRVDYAARSVICPDMYIGTNEIGIPMVFATKLTYPQPVTPWNVKELRQAVLN
GPSIHPGASMVINEDGSRTILSSSNLTQREAVAKQLLTPSTGQHRIPMKIVNRHIINGDV
LLLNRQPTLHRPSIQAHCARILPGEKVLRLHYANCKAYNADFDGDEMNAHFPQSELGRAE
AYTLVSTDQQYLVPKDGKPLAGLIQDHMVSGASMTIRGCFFTRDQYTALVYRGLTDKIGR
VKLLPPALFKPLPLWTGKQVVSTLLLNVIPENSIPLNLMGKAKIPSKAWVKEPPRAVPGY
KPETMCESQVVIRQGELLLGVLDKAHYGSSAYGLVHCCYELYGGETSGKLLSCLARLFTA
YLQLYRGFTLGVEDILVKDGANKQRRKIIQKSVTCGSKALQAAFNLLAAAGDTEARERWQ
DAHLNTDQRDFNMVDLKFKEEVNQVNNNINKVCMPLGLHRSFPENNLQLMVQSGAKGSTV
NTMQISCLLGQIELEGRRPPLMPSGKSLPCFQPYEPQPRSGGFVTGRFLTGIKPPEFFFH
CMAGREGLVDTAVKTSRSGYLQRCVIKHLEGLVVQYDLTVRDSDGSVVQFLYGEDGLDIP
KTQFLQLQQFPFIKDNYEVIRKSKCLDEVLAKMDPEAAFNHFKAIKRWKAKHERVSPRDG
AFLLFSQKKLSKLKSQIEDQTLANGREPATLQLLENWRALDESGHKKYLKKTSHCPDPCL
GLYRPDICFGSVSETFDSIVESYMDQFNVKQEFQTSSEIIDTDRLRHLLQLKWQRSLCDP
GEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASSNIKTPMMSIP
VLMNKKALKRVKTLRKKITRVCLSEISNLIHVKSCVCDMTLQVDYESEEGEEAIDEELED
VVEGGQEEADSQENSEEGSGESQPADQPQSPVIPEELEGASQDSMRISTVLQLSSAIEDY
KYDTKNWLWCELTMVLPLTKVHFDLTSVVVKQAQNAVIMETKGITRCLLNEVTIKEGKKQ
MVLNTEGINMHEMFKHADILDLNRLYSNEVHAMASTYGIEVALRVIEKEIKDVFAVYGIE
VDPRHLSLVADYMCFEGVYKPLNRFGIQSNSSPLQQMTFETSYKFLKQATMLGSYDRLSS
PSACLVVGKVVKGGTGLFDLKQPL
NT seq
4755 nt
NT seq
+upstream
nt +downstream
nt
atgctgttttcaaaagaaacaccatggaggcgattagagggcatgtcgtttggcttgttc
tccgccgatgaaataaggaagctgagcgtgaaaagtatcactaattcccagctgttggat
aatgtgggcaatgccgccgctaacgggctgtatgacctggcgctgggtccagctgataac
aaggagatctgctccacctgcatgcaagactacaccagctgtcctggccactttggtctc
gtagatctgccccttcccgtctacaaccctatgttttttgataaattatatttgctcatc
cggggttcatgcctgggatgccatatgttgaagtgtcccagagcggctgttcatttactg
ctgggccagctgaagctcctggacgtgggtgcgatgaaggaggtgtatgagcttgagaac
gttctcagtcagttggtggaggtcaatgctaagccgtctggaatagaaatccaagaagct
ctggaggcgttcattacacccattcttaaagccagtgacgacaagcagcacactgcccct
atcaaacatatctgtgagaaaaagtccagtctcattaacagtttctggagagtatacatg
ggcccgaggaaatgtccgaattgcagagccagtagagtgactgtgcgcagagaacacaac
agcaaactcatcatcatacatggatcatccacagcaagcacagaaaaggacgatgattca
ctgattaccaaacgtggattcttgacaccaagtttgctacgcgaacacgtcatcaaactc
tgggagaaagaaggtttcttcctgaagcatctgttctcagggtttgacatgaacaactca
gagaaaggcttcagtcctgaagttttctttttggagttgcttgttgttcctccatgcagg
tacaggcctgttaatcgtttgggagaccagatgttcaccaacggacagaccgtgaacctc
caggccgtgttaaaggataatttcatcattcagaaactgcttgcactaatcgctgatgag
aagaccaacgctactgaagacacacagacagagatggagcagtccagtgaatctacagag
atcagtcagaaagatcagaccttcttaacgggaatccaagggctgactctcacagacaag
ctctataacatgtgggtccgcctgcagagtcacgtcaacatcgtgtttgacagcgacatg
gacaaactgatgactgagaagttcccaggcatccgtcagctcttggagaagaaagagggt
ttgttcaggaaacacatgatgggaaagcgtgtggattacgctgcacgctcagtcatttgt
cctgatatgtacatcggaaccaatgagattggaataccaatggtttttgctaccaagttg
acgtacccacagccggtgacaccctggaacgtgaaggaactccggcaggcagtgctgaat
ggacccagcatccaccctggagcctccatggtcattaatgaagacgggtcccgaaccatc
ctcagtagcagcaacctgacccagagagaagccgtggccaaacagctcctgacccccagc
accggccagcacaggatacccatgaagattgtaaatcggcacatcattaatggggatgtg
ctgctgttaaaccgtcagcccactctccacagaccatcaattcaggcccactgtgctcgc
atcctgcccggagagaaagtgctcagactacattatgccaactgtaaggcctacaacgct
gactttgatggtgacgagatgaacgctcacttccctcagagtgagctgggcagagctgag
gcctacacgctagtgagcacagaccagcagtacttagtgcctaaagatgggaagccattg
gccggcctgattcaggaccacatggtgtctggcgccagcatgaccatccgtggctgtttt
ttcacacgggatcagtacactgcactagtctacagaggcctgacggacaagatcggcaga
gtgaagctcctgcctcccgctctctttaaacccttgcctctctggacaggaaagcaggtg
gtgtcgacccttttgctgaatgtcatcccagaaaacagcatccctttaaacttgatggga
aaagcaaagattcccagtaaagcctgggtgaaggaacctcccagagctgttccaggatac
aagccggaaactatgtgtgaatctcaggtggtcattcgtcagggagagctcttgctggga
gttctggataaagcccactatggcagctcagcgtacggtttggtccactgctgctacgag
ctctacggaggagagaccagtggcaaactgctcagctgtctggcacggctcttcactgcc
tacctgcagctttaccgcggtttcaccttgggtgtggaagacattctagtaaaagatgga
gccaacaaacagagaaggaaaattatccaaaagtcagtcacatgtggctccaaggctctc
caggctgcgtttaacctgcttgcggctgctggagacactgaagccagagaacgctggcaa
gacgcacatctgaacacagaccagagagatttcaacatggtggacctgaagtttaaagaa
gaggtcaatcaagtgaacaacaacatcaacaaggtgtgcatgccgctgggtctccaccgc
tccttcccagaaaacaacctacagctgatggtgcagtcaggagccaagggttcaactgta
aatactatgcagatctcctgtttattgggtcagattgagctggagggtcgccggccacca
ctgatgccttctgggaagtctctgccctgctttcagccctatgaacctcagccgcgatcc
ggaggattcgtaactggcagattcttgacggggatcaaacctcctgagttcttttttcat
tgtatggctggtcgtgaaggtcttgtggacactgctgtcaaaaccagtcgatctggttat
ttgcagaggtgtgtgatcaagcatctagaaggtctggtggtccagtatgatctgactgtg
cgagacagtgatggaagtgtggtccagtttctttatggagaggacggcctggacatcccc
aagacccagttcctacagctgcagcagttccctttcatcaaagacaactacgaggttatc
agaaagtcaaagtgcttggatgaagttctggctaaaatggacccagaggcagcatttaat
cactttaaagccattaagagatggaaagccaaacatgagcgtgtttcacccagagacggt
gccttcctgctcttctcacagaagaaactgagcaagttgaagtctcaaatcgaagaccag
acactggccaatgggagagagccagccactctacagctcttggagaattggagagctctg
gatgagtctggccataagaagtatttaaagaagacgtctcattgtccagacccgtgtctg
ggtctttaccggccggacatctgctttggttcagtgtctgagacctttgactccattgtt
gagtcctacatggatcagttcaatgtcaagcaggaatttcagacctcctctgaaatcatt
gacacggatagattgaggcatctcctgcagctgaagtggcagcgatctctgtgtgacccc
ggagaggccgtgggtctgctggcagctcagagcattggcgagccgtccacccaaatgacc
ctcaacaccttccacttcgccggcagaggagagatgaatgtcacattgggtattccaaga
ttaagagaaatactcatggttgcgagctctaacatcaaaacccccatgatgagcattcca
gttctgatgaacaagaaagccttgaaacgtgttaagacgctgcggaagaagataacgcgt
gtgtgtttgtcagagatctcaaatcttattcatgtaaaatcctgtgtctgtgatatgacc
cttcaggtagactatgagagtgaggagggagaggaggccatcgatgaggaactggaggat
gtggtcgagggcggacaggaagaggcagattctcaggagaactctgaggaagggtctggt
gaaagccaaccagcagaccagcctcagagtcctgtcattcctgaagagctcgagggagct
tcacaggactccatgaggatcagcactgtgcttcagttaagctccgccattgaggactac
aaatatgacaccaaaaattggctatggtgtgagctaactatggtcctacccctcactaaa
gtgcactttgacctcacgtcagtggtggtgaagcaggctcagaacgctgtcatcatggag
accaagggtatcacgcgctgcttgttaaatgaagtcaccataaaggagggcaaaaaacag
atggtgctcaacacagagggcatcaacatgcatgagatgttcaaacatgctgatatcctg
gacttgaacaggttatactccaacgaggttcatgctatggccagcacgtacggtattgag
gtggccctcagagtcattgagaaggagattaaagatgtgtttgctgtctatggtattgag
gtggacccgcgccatctctctctagtggctgactacatgtgtttcgagggggtgtacaag
cctctaaacagatttggcattcaatccaacagctccccgctgcaacagatgacctttgag
accagttacaagtttttaaagcaagccacgatgctgggttcttatgacagactcagttcg
ccctcagcttgcttggttgtaggaaaagttgtgaaaggaggaaccggcctcttcgatctg
aaacagccgttatag
DBGET
integrated database retrieval system
