Sinocyclocheilus anshuiensis: 107702901
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Entry
107702901 CDS
T04917
Name
(RefSeq) collagen alpha-2(IV) chain-like
KO
K06237
collagen type IV alpha
Organism
sanh
Sinocyclocheilus anshuiensis
Pathway
sanh04510
Focal adhesion
sanh04512
ECM-receptor interaction
sanh04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
sanh00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
107702901
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
107702901
09142 Cell motility
04820 Cytoskeleton in muscle cells
107702901
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sanh04147
]
107702901
00536 Glycosaminoglycan binding proteins [BR:
sanh00536
]
107702901
Exosome [BR:
sanh04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
107702901
Glycosaminoglycan binding proteins [BR:
sanh00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
107702901
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
107702901
NCBI-ProteinID:
XP_016360827
LinkDB
All DBs
Position
Unknown
AA seq
1669 aa
AA seq
DB search
MEGENHLQHWNTLRCFLLFFAVLILTTEVNAGVKKSGGPCGGRDCSGGCQCYPEKGARGL
PGPLGPQGPTGPNGRPGDPGLQGPKGEKGDRGRGGLMGPKGSVGMEGVPGFNGADGVPGH
PGPSGPRGKPGADGCNGTRGESGTPGIPGLNGEPGISGRPGMKGEKGDPLEMWVYMERFR
GDPGPPGFPGFIGPTGNPGYRGLPGFQGPWGPTGIKGVKGQKGETTKMLKGVKGEMGENG
ELGLPGPYSQTRPIPSEWQGEKGLKGYKGEPGDLGYLSTKGETGVSGFPGQWGNPGLNGF
PGPRGDIGLPGFPGNYGHKGDRGEPGELIGPFEDTGVGPPGPPGERGPIGEYGPKGTKGM
PGPPGPSPSEQQPVDLWGPEGPRGPKGAKGDAGEPGNPATHPGPPGPDGLPGFQGPPGPK
GSLEEFFKGAPGPRGRPGNAGKKGPKGDHGLCECTVKSTPGPAGPPGDAGDIGMAGEWGQ
HGDQGDPGPRGVDGVPGFSGARGLPGPKGRQGELRAATQKGLPGDPGDPGASGFPGEQGR
PGFDGKDGEPGLQGSSGEGPVGEPGGKGYPGWPGPPGLIGPIGQPGQVLGETKGVRGLPG
DEGQVGIDGKQGSPGAPGDCSPQGGDQWNIPVECIGDPGPPGEIGQPGLPGFSGFPGLQG
AKGIQGLSGEPGAKGEEGEPGRGGPPGPRGFVGPRGDLGYPGSKGVEGTPGLSGTPGLDG
APGEKGEHGEVLGASSGAPGVPGRPGQRGVIGLPGDPGPQGHPGMEGMPGMIGLKGESGP
PGLLGEIGRPGPPGTFGFPGQSGQVGPPGPSGKTGEPGPSGERGYQGDPGLPGPRGVKGV
TGEPGNVGLPGNFGPPGDPGQQGPFGFDGFPGLKGSRGGQGMMGFTGMPGETGLKGFSGQ
KGTIGDPGQQGAKGPPGPPGEKGERGLVGRPGEKPIIHITPHMKEVMKGAKGDHGKMGDH
GFTGPRGTKGLPGVPGKEGKDGHPGEPSETKGTRGLHGVEGLPGPKGMPGLTGLPGTEGF
PGLPGPKGGKGSSGAHGRPGESGIKGIKGVLGPTISLPGSTGLRGETGLPGSLGEKGLTG
QSGDRGSPGFNGIEGMKGYPGEPGKVGPPGSDGLQGFPGTQGHKGWPGVPGQTGTPGIQG
QPGQKGFPGLKGIFGLDGLKGQKGINGAPGSDNWGPSGEPGAKGERGETGIPSTEAGVPG
EVGFKGFIGDSGNKGESGHPGVPGARGPQGFSDIKGVRGDYGFPGPKGLPGFPGPRGIPG
DPSPFGARGENGNPGDFGLTGEKGVQGNSGEKGPSGEPGVSGRKGENGETGMMGYPGRRG
FEGDRGPVGPKGDTGPPGIPGLPGSKGLPPVPLKLPGERGPPGPMGIQGPQGWRGNPGPA
GTPGDPGVLGPNGEKGMPGLPGIPGNPGFRGEPGQLGHPGLQGEEGTRGSPGLPGTIGMP
GRSVNVGYLLVKHSQSEQIPMCPVGMSKLWDGYSLLYFEGQEKAHNQDLGLAGSCLRRFN
TMPFLYCNPGDVCYYANRNDKSYWLSTTAPIPMMPVEEAEIKPYISRCSVCEAPSVAIAI
HSQDITIPQCPAGWRSLWIGYSFLMHTAAGDEGGGQSLVSPGSCLEDFRTTPFIECNGAK
GTCHYFANKQSFWLTSIDQTFQSSPSSETLKAGQLLSRISRCQVCMKNL
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggagggtgagaaccatctacagcactggaacacattaaggtgttttctgttgttcttt
gcagtccttatccttacaacagaggtcaacgcaggagtgaagaagagtggtggaccatgt
ggtgggagagactgcagcggagggtgtcagtgttatcctgagaagggtgcgaggggattg
cctggacctcttggtccccagggtcccacaggccctaatgggcgaccaggagaccctggt
ctccagggccctaaaggagagaagggagaccgtggcagaggaggccttatgggtccaaaa
ggaagtgtgggaatggaaggtgttccagggtttaatggagcagatggtgttccgggccat
cctgggccgtctgggcctcgtggaaaaccaggagctgacggttgtaatggaacccgggga
gaatcaggaacgccaggcattccaggactcaatggcgaacctggaatatcaggtcggcca
ggaatgaagggggagaagggtgaccctttggagatgtgggtttatatggaaagattcagg
ggagatccaggaccaccaggttttcccggatttattggaccaactggtaacccagggtac
agaggactgccaggattccaaggtccttggggtcctactggcattaaaggtgttaaagga
caaaagggtgaaactactaaaatgttaaaaggagtcaaaggagaaatgggggagaatgga
gagctgggccttccaggaccttactcacaaacccgtccaatcccttcagaatggcagggt
gaaaaaggcttgaaaggttataaaggagaaccaggagatttgggatatttatctaccaaa
ggagagactggtgtgtcagggtttccaggacaatggggaaacccaggactaaatggcttt
ccaggacctagaggtgacattggactaccaggtttcccaggaaattatggtcacaaggga
gatagaggagaacctggagagctgattggtccttttgaagatactggagtgggtcctcca
ggacctccgggagagcgtggcccaattggagagtatggtcctaagggtactaaaggaatg
ccgggtcccccaggcccctctccctctgaacaacaaccagtggatttgtggggtccagag
ggaccacgtggaccaaagggagccaaaggtgatgctggagaacctggtaatcctgccact
catcctgggccacctggccccgatgggcttcctggatttcaaggacctcccggacccaag
ggatcattggaagaattcttcaaaggagcaccaggaccacgtggacgtccaggaaatgca
ggaaaaaagggaccaaagggtgaccatggtctgtgcgaatgcactgtaaaatccacacca
ggtcctgcgggtcctcctggtgatgctggggacattggcatggcaggagagtggggtcag
catggtgatcagggagacccaggacccagaggcgtggatggtgtacctggtttctctggt
gcaagaggattacctggacccaaaggcagacaaggagagctgagagccgctacacagaaa
ggactacctggtgaccctggggacccaggtgctagtggtttcccaggagagcaaggaagg
cctggatttgatggcaaagatggtgaaccaggtcttcaaggatcttctggagaaggtcct
gtaggtgagcctggagggaagggatacccaggttggccaggtcctccaggtctaataggt
ccgataggacaacccggtcaagttcttggagaaactaaaggtgtaaggggccttcctgga
gatgaaggacaagttggtattgatggaaaacaagggtcacctggtgctccaggagactgt
agcccacaaggaggagatcagtggaatattccagtggaatgtattggagatcccgggcca
ccaggagagatagggcagcctggacttccaggattcagtggatttcctggactgcaaggt
gctaaaggcatacagggtctttctggagaacctggggccaaaggagaggagggtgaacca
ggaagaggaggcccacccgggccaagaggttttgttggacctcggggcgacttaggttat
cctggctccaaaggtgtggaaggaactccaggcctttctggtacaccaggtttggatggt
gctccaggggaaaagggtgagcatggtgaagttttaggagcatcttctggagcccctgga
gtcccaggacgaccaggacagaggggtgtcattggtcttccaggagacccaggacctcaa
ggacacccgggtatggagggaatgccaggtatgattggccttaagggtgaaagtggccct
ccaggtcttctaggagagataggaagacctggaccgccaggaacatttggctttcctggg
cagtctggccaagtaggacctcccggaccatctggaaaaaccggagaaccaggtccaagt
ggagaaaggggatatcagggagacccaggccttcctgggcccagaggagtaaagggtgtc
actggagaaccaggaaatgttggtcttccaggcaattttgggcccccaggagatccagga
caacaggggccatttggttttgatggttttccagggttaaaaggttccagaggtggtcag
ggcatgatgggtttcactggaatgccaggtgagacaggtctgaagggcttttcgggacag
aaaggaacaataggtgatccaggacaacaaggtgcaaagggacctcctggccctccaggt
gaaaaaggtgagagagggttggtggggcgtccaggtgaaaagccaatcatacatataaca
ccacatatgaaagaggtcatgaagggagctaaaggtgaccatggaaaaatgggagatcat
ggcttcactggtcccagaggtacaaaaggtctaccaggtgttccaggaaaggagggtaaa
gatggacatccaggtgagcccagtgaaacaaaaggtactagaggtcttcacggagtagaa
ggacttccagggcctaaggggatgccagggcttacaggacttcctggaactgagggtttt
cctggattgcctggacccaaaggtggcaaaggctcatctggtgcccatggacggcctgga
gaatctggaatcaagggaataaaaggtgtcttgggtcctaccatcagtcttccaggatca
actggattgagaggtgaaactgggctgcctggatctttaggtgaaaagggactcacaggt
cagtctggagacagaggaagtcctggttttaatggcattgaagggatgaaaggctatcca
ggagaacctggaaaagttggaccaccaggttctgatggcctacaaggtttcccaggaacc
cagggtcataagggctggcctggcgtgcctggacagacaggaacccctggaatccaaggc
caaccaggacaaaaaggatttcctggtcttaaaggcatttttggattggatggcctgaaa
ggtcaaaagggtatcaatggtgctccaggttctgacaactggggtccttctggtgagcca
ggagcaaaaggggagagaggagagaccggcatccccagcacagaagccggtgtccccgga
gaggtgggattcaagggtttcattggagattcaggtaataagggtgaatctgggcatcca
ggtgtaccgggtgctcggggtccacaaggattttccgatataaaaggagtgcgaggcgac
tatggctttccaggcccaaaaggacttccaggtttccctggtcccagagggatcccaggt
gacccatctccattcggagcaagaggagagaatggaaatccaggtgattttggattgact
ggagaaaaaggagtccagggaaactcaggagaaaaaggaccgtcaggggaacctggagtg
tcaggaagaaaaggggaaaatggagaaacaggaatgatgggatatccaggaaggcgtggt
tttgaaggcgacaggggccctgttggacctaaaggagatactggacccccaggtattcct
ggcttacctggttctaaagggcttccaccagtcccactgaaactaccaggggagagagga
ccacctggcccaatgggtattcaaggaccacagggatggcgtggaaacccaggccctgct
ggaactcctggtgatccaggggttttgggtccaaatggggaaaaaggcatgccaggtctc
cctggaataccaggaaatccaggcttccgtggagaacctggacaattgggccaccctggt
ctacaaggtgaagaagggacccgagggagccctggtttacctggtactattggaatgccc
ggccgcagtgttaatgttggctatctgctggtgaagcacagtcagtctgagcagatcccc
atgtgccctgtgggtatgtccaagttatgggatggttacagtctcctgtactttgaggga
caggagaaggcccacaaccaagacctgggtctagccggctcatgtctccgccgttttaac
accatgcccttcctgtactgcaatcctggagacgtatgctactatgccaaccgcaatgac
aaatcctattggctgtccaccaccgcaccaattcccatgatgcccgtggaggaggccgaa
ataaaaccatacatcagccgctgctccgtgtgcgaagctccatccgtggccatcgccata
cacagtcaagatataacaattccacaatgcccagcaggctggagaagtctctggattggc
tattccttccttatgcacacggcagctggagatgaaggtggcggtcagtctctggtgtct
ccgggctcctgtctagaagatttccgcaccactcccttcattgagtgtaacggggccaag
ggtacgtgtcactacttcgccaacaagcaaagtttctggttgacgtctatcgatcagacc
ttccagagttccccttcctctgagacactgaaagccggtcagctcctgtcacgcatcagc
cgctgccaagtgtgtatgaagaacctgtga
DBGET
integrated database retrieval system