Streptomyces antimycoticus: QR300_21980
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Entry
QR300_21980 CDS
T09335
Symbol
sigM
Name
(GenBank) RNA polymerase sigma factor SigM
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
sant
Streptomyces antimycoticus
Brite
KEGG Orthology (KO) [BR:
sant00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sant03021
]
QR300_21980 (sigM)
Transcription machinery [BR:
sant03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
QR300_21980 (sigM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4_2
Sigma70_r4
Sigma70_ECF
DUF746
HTH_23
Rnk_N
HTH_16
RWP-RK
Motif
Other DBs
NCBI-ProteinID:
WJD98438
LinkDB
All DBs
Position
complement(5043328..5044017)
Genome browser
AA seq
229 aa
AA seq
DB search
MDDATIGGASDGELLARHVDGDPDAFSEIVRRHRDRLWAVALRTLGDREEAADAVQDALV
SAYRAAHTFRGQSAVTTWLHRITVNACLDRARKAASRRTSPVDDTERLEQLLEPHESAAA
PAERGDLHRELLRALRTLPPEQRAALVLVDMQGYPVAEAAKVLDVPTGTVKSRCARGRAR
LLPLLSHLHPSGRGSSPSGVGRNRTQGTSVPPTAGPNDTDAVKGGGGRA
NT seq
690 nt
NT seq
+upstream
nt +downstream
nt
ttggacgacgccaccatcggcggggcgagcgacggcgagctccttgcccggcacgtcgac
ggcgacccggacgccttcagcgaaatagtgcggcgccaccgcgacagactctgggcggtg
gcgctgcgcaccctcggcgaccgtgaggaagcggccgacgcggtccaggacgcgctcgtc
tccgcctaccgcgccgcccataccttccggggtcagtccgccgtgacgacctggctgcat
cggatcacggtcaacgcctgtctggaccgggcccgtaaggccgcctcccgtcgcacctcc
cccgtggacgacaccgagcggctcgagcaacttctggagccccatgaatcagccgccgct
cccgccgagcgtggtgatctccaccgcgaactgctccgggcgctgcgcaccctccctccc
gagcagcgcgcggctctggtgctggtcgacatgcagggttatcccgtcgcggaggcggcg
aaggtcctggacgttccgaccggcaccgtgaagagccgctgcgcccggggccgcgcacga
ctgctgccgctgctctcacatctccaccccagcgggaggggtagctcaccctcgggcgtg
ggaaggaaccggacgcaggggacgtccgtcccaccgacggcaggaccgaacgacacagat
gccgtgaagggcggaggtgggcgagcgtga
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