Schlegelella aquatica: OMP39_06870
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Entry
OMP39_06870 CDS
T08587
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
saqa
Schlegelella aquatica
Pathway
saqa03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
saqa00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
OMP39_06870
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
saqa03400
]
OMP39_06870
DNA repair and recombination proteins [BR:
saqa03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
OMP39_06870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
UZD56283
LinkDB
All DBs
Position
complement(1526713..1527762)
Genome browser
AA seq
349 aa
AA seq
DB search
MAARVVWKGAITFGLVHIPVTLRAASRRQDLDFDWLDKRDMAPVGYRRINKRTGQPIEGE
HIVKGYRYEGDEYVLMSDEDFRQANPEATQTVDILAFVDAAEVSPSYFETPYYLEAGKRG
EKGYALLREVMKRSGRIGIATVVMHTKQHLAAVRVEGPVLVLNTMRFADEMLSADDLYVP
QEDLEAVGVGARELEMAQQLVDQMTEPWRPEQYRDTYREDLLARIEAKIRAGQTHTLAAV
GEEETPARRGAEVIDLMAALRQSVQRAQRDTSAGDGRGAVKPMRGDGKTSSAPSPAPATR
PARGKPHEEEATAGERTRKTPASRKPTAPTSGRVEAARKPASTPRRKRA
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atggcagcacgcgtcgtctggaaaggcgcgatcaccttcggcctggtgcacatcccggtc
acgctgcgggccgcctcccgccgccaggacctcgacttcgattggctcgacaagcgcgac
atggcccccgtgggctatcggcgcatcaataaacgcaccgggcaacccatcgagggggag
cacatcgtcaaaggctaccgctacgaaggcgacgagtacgtgctgatgtcggacgaggac
ttccgccaggccaaccccgaagcgacgcagaccgtggacatcctggccttcgtcgacgcg
gccgaggtgtcgccttcgtacttcgagacgccttactacctcgaagccggcaaacgtgga
gaaaaaggttacgcgctgctacgcgaggtgatgaagcgcagcgggcgcatcggcatcgcc
accgtcgtgatgcacaccaagcagcacttggcggccgtgcgcgtggaaggtccggtgctg
gtgctcaacacgatgcgattcgccgacgagatgctctctgcagacgacctctacgtgccg
caggaagatctcgaggcggtcggggtgggcgcgcgcgagctcgagatggcgcagcagctc
gtcgatcagatgaccgagccctggcgccccgagcagtatcgagatacgtatcgagaggac
ctgctcgcgcggatcgaggccaaaatccgggccgggcagacacacacgctggctgcggtg
ggcgaggaggagactcccgcccggcgaggggccgaggtcatcgacctcatggccgccctg
cggcaaagcgtacagcgcgcgcagcgcgatacgtctgcgggcgatggccgcggcgcggtc
aagccgatgcgtggggatggcaagacttcctccgcgccatcgcccgcgcccgccacgcgc
cccgctcgcggcaagccccacgaggaggaggccacggcgggtgaacgcacgcgcaagacc
cccgcgtcgcgcaagccgacggcgcccacctccgggcgtgtggaggctgcccgcaagccc
gcctccacaccacggcgcaagcgcgcatga
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