Sphingomonas aliaeris: H5J25_03135
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Entry
H5J25_03135 CDS
T07559
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sari
Sphingomonas aliaeris
Pathway
sari03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H5J25_03135
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_03135
DNA repair and recombination proteins [BR:
sari03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H5J25_03135
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QQV77782
UniProt:
A0A974NVX3
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All DBs
Position
complement(732770..733621)
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AA seq
283 aa
AA seq
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MAARAYWQGQIRLALVSIPVEIYAATKSGAQIAFHQIHEPSGKRVKYEKVVPGLGAIDTD
EIVKGYEVDKGDYVLLDQDEIDAVKLESKKTLELTQFVDASEIDVLYYERPYFVVPADDL
AEEAFIVLREALRQAKKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDDKPDADLLELATTLIDKKTADFDPGKFHDRYVDALRDLIARKQKSKSNRKIIDDKD
EGGGKSGSNVVDLMAALKKSIEKPGGTTAAKAPAKKPTAKKRA
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atggcggcacgcgcctattggcaggggcagatcaggctcgcgctcgtctcgatccccgta
gagatatacgccgcaaccaaatccggcgcgcagatcgcgttccaccagatccacgaaccc
tccggcaagcgcgtgaaatacgagaaggtcgtccccggcctcggcgcgatcgacacggac
gagatcgtcaagggctatgaggtcgacaagggcgattacgtcctgctcgaccaggacgag
atcgacgcggtcaaactcgagtccaagaagacgctggaactcacccagttcgtcgatgcg
agcgagatcgacgtcctctattacgagcgcccctatttcgtcgtccccgccgacgatctc
gcggaggaggcgttcatcgtcctgcgcgaggcattgcgtcaggcgaagaaggtcggcctc
ggccaactcgcgatgcggggccgggaatatgtcgtcagcctgaaaccctgcggacgcggc
atggtgctggaaacgttgcgctatgccgacgaggtgaacaaggcgcagggctatttccgc
gacattcccgacgacaagcccgacgccgacctgctcgaactcgccacgacgttgatcgac
aagaagaccgccgacttcgatcccggcaagttccacgaccgctatgtcgacgccctgcgc
gacctgatcgcgcgtaagcagaagtcgaaatccaaccgcaagatcatcgacgacaaggac
gaaggcggcggaaagtccgggtcgaacgtggtggacctgatggccgccttgaagaagtcg
atcgagaagcccggcggcacaacggcggcaaaggcgccagcgaagaagcccacggccaag
aaacgtgcctga
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