KEGG   Sphingomonas aliaeris: H5J25_03135
Entry
H5J25_03135       CDS       T07559                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
sari  Sphingomonas aliaeris
Pathway
sari03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sari00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    H5J25_03135
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sari03400]
    H5J25_03135
DNA repair and recombination proteins [BR:sari03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     H5J25_03135
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: QQV77782
UniProt: A0A974NVX3
LinkDB
Position
complement(732770..733621)
AA seq 283 aa
MAARAYWQGQIRLALVSIPVEIYAATKSGAQIAFHQIHEPSGKRVKYEKVVPGLGAIDTD
EIVKGYEVDKGDYVLLDQDEIDAVKLESKKTLELTQFVDASEIDVLYYERPYFVVPADDL
AEEAFIVLREALRQAKKVGLGQLAMRGREYVVSLKPCGRGMVLETLRYADEVNKAQGYFR
DIPDDKPDADLLELATTLIDKKTADFDPGKFHDRYVDALRDLIARKQKSKSNRKIIDDKD
EGGGKSGSNVVDLMAALKKSIEKPGGTTAAKAPAKKPTAKKRA
NT seq 852 nt   +upstreamnt  +downstreamnt
atggcggcacgcgcctattggcaggggcagatcaggctcgcgctcgtctcgatccccgta
gagatatacgccgcaaccaaatccggcgcgcagatcgcgttccaccagatccacgaaccc
tccggcaagcgcgtgaaatacgagaaggtcgtccccggcctcggcgcgatcgacacggac
gagatcgtcaagggctatgaggtcgacaagggcgattacgtcctgctcgaccaggacgag
atcgacgcggtcaaactcgagtccaagaagacgctggaactcacccagttcgtcgatgcg
agcgagatcgacgtcctctattacgagcgcccctatttcgtcgtccccgccgacgatctc
gcggaggaggcgttcatcgtcctgcgcgaggcattgcgtcaggcgaagaaggtcggcctc
ggccaactcgcgatgcggggccgggaatatgtcgtcagcctgaaaccctgcggacgcggc
atggtgctggaaacgttgcgctatgccgacgaggtgaacaaggcgcagggctatttccgc
gacattcccgacgacaagcccgacgccgacctgctcgaactcgccacgacgttgatcgac
aagaagaccgccgacttcgatcccggcaagttccacgaccgctatgtcgacgccctgcgc
gacctgatcgcgcgtaagcagaagtcgaaatccaaccgcaagatcatcgacgacaaggac
gaaggcggcggaaagtccgggtcgaacgtggtggacctgatggccgccttgaagaagtcg
atcgagaagcccggcggcacaacggcggcaaaggcgccagcgaagaagcccacggccaag
aaacgtgcctga

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