KEGG   Sphingomonas aliaeris: H5J25_06525
Entry
H5J25_06525       CDS       T07559                                 
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sari  Sphingomonas aliaeris
Pathway
sari03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sari00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    H5J25_06525 (xth)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sari03400]
    H5J25_06525 (xth)
Enzymes [BR:sari01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     H5J25_06525 (xth)
DNA repair and recombination proteins [BR:sari03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     H5J25_06525 (xth)
SSDB
Motif
Pfam: Exo_endo_phos
Other DBs
NCBI-ProteinID: QQV78319
UniProt: A0A974NWG9
LinkDB
Position
1403030..1403803
AA seq 257 aa
MKIVTYNINGIKARLPRLVEYLAEQQPDVVCLQELKTSDETFPEADIRAAGYGAVWHGQK
SWNGVAVLAKGADPVERKRGLDGEPEDEHSRYLECDIDGTVVASIYLPNGNPQPGPKFDY
KLRWIDRLADRARVLLAEEKPVVLAGDYNVIPNDDDTFSVRAMSDDALMQPESREGFRRL
VAQGWTDALRTRYPKGGVWTFWDYQAGAWQRDAGFRIDHLLLSPVAADRLADAGVDKDYR
GREKASDHAPTWVKLRS
NT seq 774 nt   +upstreamnt  +downstreamnt
gtgaagatcgtcacctacaacatcaacggtatcaaggcgcggctgccgcgtctggtcgag
tatcttgccgagcagcaacccgatgtggtgtgcctgcaggaattgaagaccagcgacgaa
accttccccgaagcggacatccgcgccgcgggctatggcgcggtctggcacggacagaaa
agctggaacggcgtggccgtgcttgccaagggcgccgacccggtcgagcgcaagcgcggt
ctggacggcgaaccggaggacgaacatagccgctatctggaatgcgacatcgacggcacc
gtcgtcgcctccatctatctgcccaacggcaatccgcagccgggtccgaagttcgattac
aaattgcgctggatcgatcggcttgccgatcgtgcccgcgtcctgctcgcggaggaaaag
cccgtcgtgctggcgggtgattacaacgtcatcccgaacgacgatgatacgttttcggtc
cgcgccatgtccgacgatgcactgatgcagcccgaaagccgcgaagggtttcgtcgtctc
gtcgcacagggttggaccgatgccttgcgcacgcgctacccgaagggcggggtgtggacg
ttctgggattatcaggcgggtgcgtggcagcgggatgccgggttccgcatcgatcatctg
ctcctgtcgcccgtcgccgccgatcggctggccgacgccggtgtcgacaaggactatcgc
ggtcgcgaaaaggccagcgaccatgcccccacctgggtcaaactgcgctcgtaa

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