Sphingomonas aliaeris: H5J25_06525
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Entry
H5J25_06525 CDS
T07559
Symbol
xth
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H5J25_06525 (xth)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_06525 (xth)
Enzymes [BR:
sari01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
H5J25_06525 (xth)
DNA repair and recombination proteins [BR:
sari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
H5J25_06525 (xth)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Motif
Other DBs
NCBI-ProteinID:
QQV78319
UniProt:
A0A974NWG9
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All DBs
Position
1403030..1403803
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AA seq
257 aa
AA seq
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MKIVTYNINGIKARLPRLVEYLAEQQPDVVCLQELKTSDETFPEADIRAAGYGAVWHGQK
SWNGVAVLAKGADPVERKRGLDGEPEDEHSRYLECDIDGTVVASIYLPNGNPQPGPKFDY
KLRWIDRLADRARVLLAEEKPVVLAGDYNVIPNDDDTFSVRAMSDDALMQPESREGFRRL
VAQGWTDALRTRYPKGGVWTFWDYQAGAWQRDAGFRIDHLLLSPVAADRLADAGVDKDYR
GREKASDHAPTWVKLRS
NT seq
774 nt
NT seq
+upstream
nt +downstream
nt
gtgaagatcgtcacctacaacatcaacggtatcaaggcgcggctgccgcgtctggtcgag
tatcttgccgagcagcaacccgatgtggtgtgcctgcaggaattgaagaccagcgacgaa
accttccccgaagcggacatccgcgccgcgggctatggcgcggtctggcacggacagaaa
agctggaacggcgtggccgtgcttgccaagggcgccgacccggtcgagcgcaagcgcggt
ctggacggcgaaccggaggacgaacatagccgctatctggaatgcgacatcgacggcacc
gtcgtcgcctccatctatctgcccaacggcaatccgcagccgggtccgaagttcgattac
aaattgcgctggatcgatcggcttgccgatcgtgcccgcgtcctgctcgcggaggaaaag
cccgtcgtgctggcgggtgattacaacgtcatcccgaacgacgatgatacgttttcggtc
cgcgccatgtccgacgatgcactgatgcagcccgaaagccgcgaagggtttcgtcgtctc
gtcgcacagggttggaccgatgccttgcgcacgcgctacccgaagggcggggtgtggacg
ttctgggattatcaggcgggtgcgtggcagcgggatgccgggttccgcatcgatcatctg
ctcctgtcgcccgtcgccgccgatcggctggccgacgccggtgtcgacaaggactatcgc
ggtcgcgaaaaggccagcgaccatgcccccacctgggtcaaactgcgctcgtaa
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