Sphingomonas aliaeris: H5J25_11410
Help
Entry
H5J25_11410 CDS
T07559
Symbol
mutM
Name
(GenBank) bifunctional DNA-formamidopyrimidine glycosylase/DNA-(apurinic or apyrimidinic site) lyase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
sari
Sphingomonas aliaeris
Pathway
sari03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sari00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
H5J25_11410 (mutM)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sari03400
]
H5J25_11410 (mutM)
Enzymes [BR:
sari01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
H5J25_11410 (mutM)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
H5J25_11410 (mutM)
DNA repair and recombination proteins [BR:
sari03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
H5J25_11410 (mutM)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Motif
Other DBs
NCBI-ProteinID:
QQV76140
UniProt:
A0A974NSK8
LinkDB
All DBs
Position
complement(2431050..2431862)
Genome browser
AA seq
270 aa
AA seq
DB search
MPELPEVETTVRGLRPVLDGARVASVETRRGDLRRPFPVDLRQRMTGATITGLSRRAKYG
LIGTDRGDTMIFHLGMSGRWRVDPAEVLPHDHLLIATEAGRHLALNDPRRFGSVDLWPTD
ALDAYPPFGAMGPEPLGPNLTAEHLLTALAGRKASIKLMLLDQRIVAGLGNIYVCEALFL
SRISPKTAAGRISLPRLERLVVAIREVLLAAIEAGGSSLRDYARPDGELGYFSKQFAVYG
REGEPCACGGKVKRYSEGGRSTFWCPKCQR
NT seq
813 nt
NT seq
+upstream
nt +downstream
nt
atgcccgaactgcccgaagtggagacgaccgttcgcggcctgcggcccgtgctggacggt
gcgcgggtggcatcggtggagacgcggcgcggcgatttgcggcggccatttccggtcgac
ctgcgccagcggatgaccggagcgacgatcaccggactgagccggcgtgcgaaatatggg
ctgatcgggacggatcgcggcgatacgatgatcttccatcttggcatgtcggggcggtgg
cgggtcgatccggcggaggtgctgccgcacgaccacctgctgatcgccaccgaggcgggg
cggcacctggcgctgaacgatccgcggcgattcggctcggtcgatctgtggccgaccgac
gcgctggacgcgtatcccccgttcggcgcgatggggccggagccgctgggaccgaacctg
accgcggagcacctgctcacggcgctggcggggcgcaaggcatcgatcaagctgatgctg
ctcgaccagcggatcgtcgcggggctgggcaatatctacgtctgcgaggctttgttcctg
tcgcggatctcgccaaagaccgccgcggggcggatatcgctgccgcggctggagcgactc
gtcgtcgcgatccgggaggtgttgctggcggcgatcgaggcaggcggatcctccctacgc
gactatgcgcgcccggacggcgagctgggatatttttccaagcaattcgcagtctatggt
cgcgagggcgagccatgtgcctgcggcggcaaggtaaagcggtatagcgagggcggacgt
tcgaccttctggtgccccaaatgccaacgttga
DBGET
integrated database retrieval system
