Salmo salar (Atlantic salmon): 106573213
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Entry
106573213 CDS
T04363
Name
(RefSeq) aryl hydrocarbon receptor nuclear translocator-like protein 1
KO
K02296
aryl hydrocarbon receptor nuclear translocator-like protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106573213
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
Factors with PAS domain
106573213
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Gene cluster
GFIT
Motif
Pfam:
PAS_11
PAS
PAS_3
HLH
PAS_9
Per3-like_PAS-A
PAS_4
PAS_2
Motif
Other DBs
NCBI-GeneID:
106573213
NCBI-ProteinID:
XP_014003521
UniProt:
A0A1S3ML15
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Position
ssa16:12067495..12095642
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AA seq
621 aa
AA seq
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MNICDYLMADQRMDITSTMNEFMSPSSSDLISSSVNTPGMDYTRKRKGSTSDYQIDGFSF
EECGDHQGRIKNAREAHSQIEKRRRDKMNSFIDDLAALVPTCNAMSRKLDKLTVLRMAVQ
HMKTLRGAANPYTEANYKPSFLSDDELKHLILRAADGFLFVVGCDRGKILFVSESVYKIL
NYCQNDLIGQSLFDYLHPKDIAKVKEQLSSSDTAPRERLIDAKTGLPVKTDITPGLSRLC
SGARRSFFCRMKCNRPYIKTEDKDFPSTCSKKKADRKSFCTIHSTGYLKSWPPSKMGLDN
DNEPDNEGCNLSCLVAIGRLHPHIVPQPSHEDIRVKPTDYVSRHSIDGKFVFVDQRATAI
LAYLPQELLGTSFYEYFHQDDIGHLAECHRQVLQMREKINTNCYKFKIKDGTFITLRSRW
FSFMNPWTKEVEYIVSTNTVVSCSMLDGADSSYPQSAVSPTLASMDSVLTSEGGGRRALQ
TVPGIPGGTRAGAGKIGRMIAEEVMETQRTRGSTPSSCGSSPLNISTPPPDCSPGGKRIQ
NGTPDLPSAGTLRGGPDTIGYPYSNQSIMSDNSHLSIDIMDEPGSSSPSNDEAAMAVIMS
LLEADAGLGGPVDFSDLPWPL
NT seq
1866 nt
NT seq
+upstream
nt +downstream
nt
atgaacatttgtgattatctaatggcagaccaaagaatggacattacctctacaatgaat
gagttcatgtcccccagctccagcgacctgatcagcagctccgtcaacaccccaggcatg
gactacacccgcaagagaaagggcagcacctccgactaccaaattgatggattttctttc
gaggagtgtggtgatcaccagggccggataaaaaatgccagggaggcacacagtcagatt
gagaagcggcgcagggacaagatgaacagcttcatagacgacctggcggcactagtccct
acctgcaacgctatgtcccgcaagctggacaaactcacggtcctacgcatggctgtccag
catatgaagacattaagaggagcagcaaacccttacacagaggcgaactacaagccgtct
ttcctgtccgatgatgaactgaagcacttaatattgagggctgctgacggctttctgttt
gttgttggatgtgatcgtgggaagatcctttttgtctcggagtcagtttacaagatcctc
aactattgccagaatgacctaattggccagagtctgtttgattacctgcatcctaaagac
atcgccaaagtcaaggagcaactgtcgtcatcggatacagcaccccgggagcgactcatc
gatgccaaaaccggtctaccagttaagacagacatcacccctgggctatctcgactgtgc
tccggggccagacgctcgttcttctgccgaatgaagtgtaaccggccctatatcaaaaca
gaggacaaggacttcccctccacctgctccaaaaagaaagccgaccgcaagagcttctgc
acgatccacagtactggctacctgaagagctggccgcccagcaagatgggcctggacaat
gacaacgaacccgacaatgagggctgtaacctcagctgcctggtggccatcggccggctg
catccccacatcgtcccccagccctcccacgaggacatccgcgtcaaacccaccgactac
gtctcccgccactccatcgatgggaagtttgtctttgttgaccagagggccacagccatt
cttgcatacttaccccaggagcttcttggcacctctttctacgagtatttccatcaggat
gatattggccacctggcagaatgtcacagacaagtgcttcagatgagagaaaagatcaac
acaaactgttataagttcaagattaaagatggcaccttcatcactctgcgaagccgctgg
ttcagtttcatgaatccctggaccaaagaggtggagtacatcgtctccacaaacacagtg
gtctcgtgcagtatgctggatggtgcagactccagctatcctcagtctgccgtctctccc
actctcgcctctatggacagtgtgctgacgtcagaaggtggagggagacgggcccttcag
acggtgccaggcatccccgggggaacacgtgcaggtgccggtaagatcggtcgcatgatc
gcagaggaggtgatggagactcagaggacccgaggctcgaccccctccagctgtggctcc
agccccctgaacatcagcacccctcctccagactgctctccagggggcaagagaattcaa
aatggaacgccagaccttccgtcggcagggacgctacgaggaggacccgacaccattgga
tacccatactccaaccagtctattatgagtgacaactcgcacctcagcattgacatcatg
gatgaaccaggctctagcagccccagtaacgacgaggcagccatggctgtgatcatgagt
ctcctggaggctgacgcaggcctcggtggccctgtagacttcagtgacttaccctggccc
ttgtga
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