Salmo salar (Atlantic salmon): 106579218
Help
Entry
106579218 CDS
T04363
Symbol
rhbdl1
Name
(RefSeq) rhomboid like 1
KO
K02857
rhomboid-related protein 1/2/3 [EC:
3.4.21.105
]
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sasa01002
]
106579218 (rhbdl1)
Enzymes [BR:
sasa01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.21 Serine endopeptidases
3.4.21.105 rhomboid protease
106579218 (rhbdl1)
Peptidases and inhibitors [BR:
sasa01002
]
Serine peptidases
Family S54: Rhomboid family
106579218 (rhbdl1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rhomboid
EF-hand_7
EF-hand_1
DUF5580
DUF5580_M
EF-hand_11
Motif
Other DBs
NCBI-GeneID:
106579218
NCBI-ProteinID:
XP_014014387
UniProt:
A0A1S3NG52
LinkDB
All DBs
Position
ssa19:complement(53280537..53336182)
Genome browser
AA seq
372 aa
AA seq
DB search
MDRSSLFQLIQEQLDPDNTGFIAVENFTSLVEHHELQLDPSKLDMLFALVQSNEDGQVCY
QELIELMSSKRSSSFRRAIANGRRTLQREILLDETGLGVYKRFVRYVAYEILPCETDRRW
YFHQNSLCPPPVFMAIITIIQIIVFMCYGIMLNKWVLQTYQPDFMKSSLVYHPRHRLQVW
RFFSYMFMHVGLEQLGFNALLQLMIGVPLEMVHGILRISLLYMAGVVAGSLTVSITDMRA
PVVGGSGGVYALCSAHLANVVMNWAGMRCPYKLLRMILALVCMSSEVGRAVWLRFSPPLP
SSGPQPSFMAHLAGAVVGISMGLLILRSYEESLQKQCSWWVILFSFITFLLFAIFWNIFA
YELLGVQLPPAP
NT seq
1119 nt
NT seq
+upstream
nt +downstream
nt
atggatagaagctctctgtttcagctcatacaagagcagctggacccagacaacaccggt
ttcatcgcagtggagaacttcaccagtctggtggagcaccatgagctgcagctggacccc
tccaaactggacatgctgtttgccctggtgcagagcaacgaggatggacaggtgtgctac
caggagctcatcgagctgatgagcagcaagcgctccagcagtttccgacgggccatcgcc
aatggccgccgcacactgcagcgggagatcctattggacgagacgggcctgggcgtgtac
aagcgctttgtgcgctacgtggcctatgagatcctgccctgcgagacagaccggcgctgg
tacttccaccagaacagcttgtgtccccctcctgtcttcatggccatcattaccatcatc
cagatcattgtgttcatgtgctacggcatcatgctgaataagtgggtactgcagacatac
cagccagacttcatgaagagctccctggtgtaccatcccagacaccgcctccaggtgtgg
cgtttcttcagctacatgttcatgcacgttgggttggaacagctggggttcaacgctctg
ctccagctgatgatcggtgttcccttggagatggtccatggcatcctacgcatcagtctg
ctctacatggctggtgtagtggcaggttccctgacggtgtccatcacagacatgcgtgct
ccagtggtggggggctccgggggtgtctacgctctgtgctcagcgcatctggccaacgtc
gtcatgaactgggccggtatgcggtgtccatacaagctcctccgcatgattctggcactg
gtgtgcatgagttcggaggtgggccgtgccgtgtggctgcgcttctccccgcccttgccc
tcctcggggccccagcccagcttcatggcccacctggcgggggcggtagtgggcatcagc
atgggcctgctcatcctgcgcagctacgaggagagcctgcagaagcagtgctcctggtgg
gtcatcctcttctccttcatcaccttccttctcttcgccatcttctggaacatcttcgcc
tacgagctgctgggggtgcagcttccacccgctccctga
DBGET
integrated database retrieval system
