Salmo salar (Atlantic salmon): 106580104
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Entry
106580104 CDS
T04363
Name
(RefSeq) ubiquitin-protein ligase E3B-like
KO
K10588
ubiquitin-protein ligase E3 B [EC:
2.3.2.26
]
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
106580104
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
sasa04121
]
106580104
Enzymes [BR:
sasa01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.26 HECT-type E3 ubiquitin transferase
106580104
Ubiquitin system [BR:
sasa04121
]
Ubiquitin ligases (E3)
HECT type E3
106580104
BRITE hierarchy
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
HECT
IQ
Motif
Other DBs
NCBI-GeneID:
106580104
NCBI-ProteinID:
XP_014016249
UniProt:
A0A1S3NLG1
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All DBs
Position
ssa20:13294305..13320741
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AA seq
1065 aa
AA seq
DB search
MFSAAQSSKSEFLDKARQAREERKGYKARDRAATLIQALVRRFLCRCRLQKQIRKEVDDL
FQDAGTTKRNALSIFKIARKLLFIFCQDDKLRFEKLCRSILGSMDVENEPKVWYVSLALS
KDLTIPWIKQIKDVLWISCQFLKKLKPDIMQDNKLVTLYLTMLVTFTDTSTWKIVRGKGE
ALRPALTRICENIMGHLNQKGFYSILQILLTNGLARSRPSLTKGTLTAVFTLALRPVIAA
HFSDNLLRSLLIHIMSVPAVVSHIYTITPECMTTIQTHDLLRKFILFLSREEQCVDICVC
LEGSHTLCLLGNLIHLGYLNEKVLEEEANHFVMELTDMLSYCQRYVSQKKSNLTHWHPVL
GWFSQTVDYGLNESMPLVTKQLQYLWGMPVIRTLFSDVLSKKLETQEPTPPPQPTTSQNN
LPVKSLFKRAFQKSASVRNILKPVGGRRVDSAEVQKVCSICVLYQTALTTLTQIRLQILT
GLTYLDDLLPKLWAFICELGPQGGLKLFIECLNNDTEESQQLLAMLMLFCDCSRHLITIL
DDIEVYEEQISFKTEELVTISSFLNTFVYKMVWDGILENAKGEKLDLFHSVHGWLMVLYE
RDCRRRFSPDDNWLRKDLKPSLLFQELEKGKRRAQLLLQYIPHVIPHKNRVLLFRNIVTK
EKETLGLVETSSASPHVTHITIRRSRMLEDGYDQLRRLPVNSIKGVIRVKFVNDLGVDEA
GIDQDGVFKEFLEEIIKKVFNPALNLFKTTSGNERLYPSPSSYIHENHLQLFEFVGKMLG
KAMYEGIVVDVPFASFFLSQVMGHHHSTFYSSIDELPSLDSEFYKNLTSIKRYDGDVGDL
GLTLSYDEDVMGQLVCHELIPGGKTMPVTNENKISYIHLMAHFRMHTQIKEQTAAFIRGF
RSIINPEWLHMFSTPEVQRLVSGDNAEIDLDDLKKHTVYYGGFHSSHRVIIWLWDILSSD
FSSEERAMFLKFVTSCSRPPLLGFAYLKPPFSIRCVEVSDDQDTGDTLGSVLRGFFTIRK
KEPGGRLPTSSTCFNLLKLPNYSKKSILRDKLRYAISMNTGFELS
NT seq
3198 nt
NT seq
+upstream
nt +downstream
nt
atgtttagtgcagctcagagttccaagtctgagttcctggacaaagccaggcaggcgcgt
gaggagaggaaggggtacaaagcaagggacagagcagccaccctaattcaagctctggtc
aggagattcctctgtcgctgcagactccagaaacaaataaggaaagaagttgatgactta
ttccaagatgccgggaccacaaaaagaaacgcactatccatttttaaaattgcacggaag
ttactattcatcttttgccaagatgataaattgagatttgaaaagctttgtcgctccatt
cttggcagcatggatgttgaaaatgagcccaaagtttggtatgtgtcattggccctttct
aaagacctcaccatcccttggatcaagcagattaaagatgtcctgtggatctcctgtcag
ttcctgaaaaaattaaagcctgacatcatgcaggacaataagctggtgactctatacctc
accatgctggtgaccttcacagacacatcaacctggaagatagtgagagggaaaggcgag
gccctcagaccagcattgacccggatctgtgagaacatcatggggcatctcaatcaaaag
ggattttattcaatactgcagattctactcaccaacggattggcacgctccagaccctct
cttaccaagggcacactcacagcagtattcacgctggcattaagacctgtcattgctgct
cacttctctgacaacttgctgaggtctctcctcatccacatcatgtctgtcccagcagtt
gtctcccacatctacaccatcaccccagagtgcatgaccaccatccagacccacgacctg
ttgaggaagttcatcctgttccttagccgcgaggagcagtgtgtcgacatctgtgtctgc
ctggaggggagccacacactgtgcttactgggtaacctgattcacctgggctacctcaac
gagaaagtactggaggaggaggccaaccactttgtgatggaactgacggacatgctgtcc
tactgccagagatacgtgtcccagaagaaatctaacctcacccactggcaccctgtcctg
ggctggttctcccaaaccgtagactacggtctgaatgagtccatgccactggtcacgaag
cagctgcagtacctgtggggcatgcctgtgatccggacgctcttcagtgacgtccttagc
aaaaagctggagacccaagagcccacgcctccgccacaacctaccacgtcccaaaacaac
ctgccagtcaagagtctattcaagcgggcgtttcagaagtctgcctcagtgcgaaacatc
ctgaagccagttggcgggagacgggtggactccgcagaggttcagaaagtgtgcagtatc
tgtgtactgtaccagacagccctcaccacgctcacccagatacgactgcaaatcctcact
ggcctaacctacctggacgacctgctgcctaagctgtgggccttcatctgcgaactagga
ccccaaggagggctcaagctgttcatagagtgcctgaacaacgacacagaggagtctcag
cagctgctagccatgctcatgctgttctgcgactgctccagacacctcatcacgatcctg
gatgacattgaagtttacgaagagcagatctcgtttaagacggaagagctcgtaaccatc
tcctcgtttctcaacacgtttgtttacaagatggtctgggatggcatcttagagaatgcc
aagggagagaagctagacctgttccacagtgttcacggctggctgatggtgctttacgag
cgggactgcaggaggaggttctcccctgatgacaactggctgcgcaaggatctaaagccg
agccttttgttccaagagctggagaagggcaagaggagagcccagctgttacttcagtac
atcccacacgtcattccacacaaaaacagggtcctgctgttccgaaacattgtcaccaag
gagaaggaaaccttgggattggtggagaccagctccgcctctccgcatgtcacccatatc
accattcgccgctcacggatgttagaggatggttatgaccagctccgccggttgcctgtc
aactccatcaaaggtgtgatccgcgtgaagtttgtcaacgacctgggtgtggacgaggcc
ggcatcgaccaggacggcgtcttcaaggagttcctggaagagatcatcaagaaagtcttc
aatccagctctcaacctctttaagaccaccagtggcaacgagaggctgtacccctcccct
tcgtcctacatccacgagaaccacctgcagctctttgagtttgtggggaagatgcttggc
aaagcaatgtatgagggcatcgtggtggacgtacccttcgcctccttcttcctcagccag
gtcatgggtcaccaccacagcaccttctacagctccattgacgagctgccctccctggac
tctgagttctacaagaacctcacctccatcaagcgctatgacggggatgttggtgatttg
ggactgacactatcgtatgacgaggatgttatgggacagctggtctgtcatgagctgatt
cctggaggaaagacgatgccagtcaccaatgaaaacaagatcagctatatccatctgatg
gcgcacttccgcatgcacacgcagataaaagagcaaacggcagctttcatccgagggttc
cgcagcatcatcaaccctgagtggctgcacatgttctccacccccgaggtccagcgcctt
gtctccggggacaatgctgagatagacctggacgacctcaagaaacacacagtgtactat
ggaggtttccacagcagccatcgggtcatcatctggctatgggacatcctgtccagtgac
ttctcctctgaggaaagggccatgttcctcaagtttgtcaccagctgttcgagaccaccc
ctcctgggttttgcctacctcaagccccctttctccattcgctgtgtggaggtgtccgat
gatcaggacacgggggacaccctgggaagtgtcctgcggggtttcttcaccatccggaag
aaggagcctggcggccgcctccccacctcatccacctgcttcaacctgctcaagctgcct
aactacagcaagaagagcatcctgcgtgacaagctccgctatgccatcagtatgaacaca
ggttttgagctctcctaa
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