Salmo salar (Atlantic salmon): 106585935
Help
Entry
106585935 CDS
T04363
Name
(RefSeq) nucleotide-binding oligomerization domain-containing protein 1-like
KO
K08727
nucleotide-binding oligomerization domain-containing protein 1
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04621
NOD-like receptor signaling pathway
sasa05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09150 Organismal Systems
09151 Immune system
04621 NOD-like receptor signaling pathway
106585935
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
106585935
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04054 Pattern recognition receptors [BR:
sasa04054
]
106585935
Pattern recognition receptors [BR:
sasa04054
]
Cytoplasmic pattern recognition receptors
NOD-like receptors
106585935
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
NACHT
NLRC4_HD2
LRR_6
NOD2_WH
LRR_4
AAA_30
SLFN-g3_helicase
ATPase
PIF1
AAA_22
AAA_16
DAP3
Motif
Other DBs
NCBI-GeneID:
106585935
NCBI-ProteinID:
XP_014028158
UniProt:
A0A1S3PKG5
LinkDB
All DBs
Position
ssa24:complement(43979608..43984785)
Genome browser
AA seq
729 aa
AA seq
DB search
MTHLNKKYPSIFTGDLYNQSALEVVKNILVSLKEGAFRATVNILKNMDQNELADSLQRDE
GVCQFCEKLQHQLKQQTYFLPTITQGEKVQLQYMYTDTLMELLSDKNERLGYLEGVDQLL
SQKGVFNDKAQVTFITGDAGTGKSILLQQSQSLWSKGELDTGARFLFAFSCRQFSAFQES
DKISLWDLIFKHNYTCPDGDMRNNVVECILKNPEMAIFTFDGYDEINSNFDQGTDYEISS
TEETAHPLVLLKSLLSGKLLNGSQKVVTARTGTEFLSMLVRKRVILKGFSIDQLQKYTDK
YSHGNEDQKLVSVQINSNHLLQSLCLIPLFCWIVFESCSQSVEILKTLDHGVTLTSIFMV
LVRAFFSRSNLNIYTEAGSWKLRAFAKLAHLGMEKEKFVLNYDHLYSCGIGEKDLKVGIL
IPASYYDNGKTATFQFMHLTLQSFLTALHLVLEEQMSTRGIVQFFPQLQSQHFLHLPWRG
GSKSQTKSSSQTNEHHHYTNLFLCGLLSKQNNDLQEPLMSQPLLRKKQELLISFLSDNVK
LNFRNLPLDKIDDGIAVRLTHDMLRMLRYIFETRSDKLAKLAAKGFSAQVIKLTYCKVDS
VDCGVLAFVLQYQKEFYCINLDNNNISDYGIRQLKPLFSNLTTLRLCDNQIRDEGVAIFT
NEFLKYKALKGLTLFTNQITDIGAKHIARIIEECPHFRRLALGNNRITGEGGRYLANAIQ
RSKAIYYVG
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgacccatctgaacaagaaatacccttcaatcttcacaggcgatctgtacaatcagagt
gcccttgaagttgtcaaaaacatacttgtgagcctcaaagagggggctttcagggccact
gtgaacatcctgaagaacatggatcagaatgaacttgctgattcactgcagagagacgag
ggagtctgtcagttctgtgagaagctacagcaccaactaaaacaacaaacatatttcctc
cccactatcactcagggagagaaagttcaactgcaatatatgtacacagacaccttaatg
gaactgcttagtgacaagaacgagagactaggatacctagaaggtgtggatcaactacta
agtcaaaaaggagtttttaatgataaagcacaggtcactttcatcacgggcgatgctggg
actggcaaatctatattgcttcaacagtcacagagtctctggtccaaaggtgaactggac
acaggggcgaggttcctcttcgcgttctcctgcagacagttcagtgcattccaagagtcg
gataagatttctctttgggatctcatcttcaagcataactacacatgcccagatggagat
atgagaaacaacgttgttgaatgcatccttaagaacccagagatggcgatctttacattt
gacggatatgatgagatcaacagtaattttgatcagggaaccgactatgagatctcctca
actgaggagacagcacatccattagtgttgctgaagagcctactcagcgggaagttactc
aatgggtcgcagaaggttgtgacagctcgaactggcacagaattcctgagtatgttggtt
cgaaagagggtaattctaaaaggcttctcaattgatcagttgcagaagtacactgacaaa
tattcccacggaaatgaggatcagaagctggttagtgtccaaataaactctaaccacctc
ctccaaagcctctgcctaattcctctgttctgctggattgtctttgagagttgcagtcaa
tcggtggagatcttgaaaactttggatcatggtgtgaccctaaccagtatcttcatggtc
ctggtcagggctttctttagccgctcaaatctcaacatatacacagaggctggcagttgg
aagcttagagcttttgcgaagttggcccatctcgggatggagaaagaaaagtttgtgctc
aactatgatcatttatactcttgtggtattggagaaaaggacttaaaggtggggatctta
ataccagcaagctattatgataatggcaaaactgcaacatttcagttcatgcatctcact
ctccagtctttcctcactgctctccatcttgtgctagaagaacagatgagtacaagaggc
attgtgcaattctttccacagttgcagagtcagcactttcttcatttgccatggagaggg
ggatcaaaatctcagactaagagcagttctcagaccaacgagcatcatcattacaccaat
ctcttcttgtgcggtctgctttccaaacaaaacaatgacctgcaagagcccttaatgtct
caacctttgttgagaaagaaacaagagcttctcatttctttcctctcagataatgtgaag
ttgaatttcagaaatttacccctggacaaaatcgatgacgggattgcagtgcgactgaca
cacgacatgctacggatgctaaggtacatctttgaaacaaggagtgacaagctggccaag
ttggctgccaaaggcttctctgctcaggtcattaagctcacatactgtaaagtagactcg
gtggactgtggagtgctcgcctttgtactgcagtatcaaaaggaattctactgtataaac
ctggataacaacaacatttcagactatggcattcggcagctaaaaccattgttcagtaac
ctgaccaccttaaggctttgtgacaatcaaatccgagatgagggtgtggctatatttaca
aatgaatttctgaagtacaaagcgttaaagggactcacacttttcaccaatcaaatcact
gacattggtgcaaaacacattgcaaggattattgaagagtgcccccatttccgacggctt
gcacttggaaacaacagaattaccggtgagggagggaggtacttggctaatgcgattcaa
aggagcaaagccatctactatgtggggtga
DBGET
integrated database retrieval system
