Salmo salar (Atlantic salmon): 106588010
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Entry
106588010 CDS
T04363
Name
(RefSeq) nuclear receptor ROR-alpha-like
KO
K08532
RAR-related orphan receptor alpha
Organism
sasa
Salmo salar (Atlantic salmon)
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sasa03000
]
106588010
09183 Protein families: signaling and cellular processes
03310 Nuclear receptors [BR:
sasa03310
]
106588010
Transcription factors [BR:
sasa03000
]
Eukaryotic type
Zinc finger
Cys4 thyroid hormone receptor-like
106588010
Nuclear receptors [BR:
sasa03310
]
1. Thyroid hormone like
1F. RAR-related orphan receptor
106588010
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
zf-C4
Hormone_recep
Motif
Other DBs
NCBI-GeneID:
106588010
NCBI-ProteinID:
XP_014032147
UniProt:
A0A1S3PWU1
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Position
ssa26:43622108..43677678
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AA seq
326 aa
AA seq
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MYFVISAMKAQIEIIPCKICGDKSSGIHYGVITCEGCKGFFRRSQQSNAGYSCPRQKNCL
IDRTSRNRCQHCRLQKCLTVGMSRDAVKFGRMSKKQRDSLYAEVQKHRLQQAQQLQRDLH
PHHNPQNPGEVEPLSPHYGLTDLHEDLGGYMEEHSPEGGNGPASKGGSDSGGAGGFYLDI
QPSPDQSGLDINGIKPEPLCDYGSSQGFFPYCSFTNGETSPTVSMAELEHLGQNISKSHQ
ETCQYLREELQSMSWQAFLQEEIETYQTKPEEVMWQLCAIKITEAIQYVVEFAKRIDGFM
ELCQNDQIVLLKAGRQNYGTSTDDTS
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtattttgtgatctcagctatgaaagctcaaattgaaattattccttgcaagatatgt
ggagataagtcgtcaggtatccactacggcgtgatcacctgcgaaggctgcaagggtttc
ttcaggaggagccagcagagtaatgcagggtactcctgccctcgtcagaagaactgtttg
attgacaggaccagcagaaaccgctgccaacactgtagactgcagaaatgcctgaccgta
ggcatgtcacgggacgcggtgaagtttggccgtatgtccaagaagcagagagacagcctg
tatgctgaggtccagaaacaccgtctccagcaggcccagcagctgcagagagacctccac
cctcatcacaacccccagaacccgggggaggtcgagcctctctctccccactacggcctc
accgacctccacgaagacctgggagggtacatggaggaacacagccccgaggggggtaac
ggcccagcctccaaggggggctctgactcaggaggagcgggggggttctacctggacatt
cagccgtctcctgatcagtctggtctggatattaacggtataaaaccagagcctctgtgt
gattatggttccagccagggtttcttcccctactgttccttcaccaacggagagacgtct
cccacagtatctatggctgagctagaacacctgggccagaacatctccaagtcccaccag
gagacgtgtcagtacctgagggaggagctgcagagcatgagctggcaggccttcctccag
gaggagatagagacctaccagacgaagccagaggaggtgatgtggcagctgtgtgccatc
aagataacggaagccatccagtacgtggtggagttcgccaaacgcattgacggcttcatg
gagctctgtcagaacgaccagatagtgctgctcaaagcaggtagacaaaattatggaacg
tctactgatgacacgtcataa
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