Salmo salar (Atlantic salmon): 106604302
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Entry
106604302 CDS
T04363
Name
(RefSeq) cohesin subunit SA-2-like
KO
K06671
cohesin complex subunit SA-1/2
Organism
sasa
Salmo salar (Atlantic salmon)
Pathway
sasa04110
Cell cycle
Brite
KEGG Orthology (KO) [BR:
sasa00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
106604302
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sasa03036
]
106604302
Chromosome and associated proteins [BR:
sasa03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
106604302
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
STAG
SCD
Motif
Other DBs
NCBI-GeneID:
106604302
NCBI-ProteinID:
XP_014054288
UniProt:
A0A1S3RPU1
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Position
ssa05:complement(11549263..11580133)
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AA seq
1285 aa
AA seq
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MIAAPELPSEFHYPQDSDTRFSSDTDFSEAPDVSINPTKGKGGKKGKKAAGEKGKGGKGV
GGAGRMNGHYQENGMENLMLFEVVKMGKSAMQSVVDDWIEAYKNDRDMALLDLINFFIQC
SGCKGVVSGEMFRNMQNSEIIRRMTEEFDEDSGDYPLTMAGPLWKKFKGSFCEFIAVLVR
QCQYSIIYDEYLMDTVISLLTGLSDSQVRAFRHTSTLAAMKLMTALVNVALNLSINMDNT
QRQYETERNKNVAKRANDRLELLLQKRKELQENQDEIENMMNAIFKGVFVHRYRDAIAEI
RAITIEEIGMWMKLYSDAFLNDSYLKYVGWTMHDKQGEVRLKCLTALQGLYYNRELNTRL
ELFTSRFKDRIVSMTLDKEYDVAVQAIKLLTLVLHSTDEVLSPEDCESVYHLVYSAHRPV
AIAAGEFLFKKLFSTREPEEEGAPKRRGRQSPNANLIKTTVFFFLESELHEHAAYLVDSL
WESGADLLKDWECMTSLLLDDPVPGEEALTDRQETALIEIMLCTVRQAAECHPPVGRGTG
KRVMTAKEKKTQLDDRTRMTELFAVTLPPLLAKYSIDTEKVTNLLQLPQFFDLDIYTTGR
LEKHLEALLRQIREIVEKHTDIEVLEVCSKTYHALCNEEFTIFNRVDIARSQLLDEMVDK
FNRLLEDFLQEGEEPDDDDAYQVLSTLKRITAFHNAHDLSQWDLFSSNFKLLNTGIENGD
MPEQIVVHALQCTHYVVLWHLAKVSEGSHRKEELVSLRKQMRMFCLMCQRYLTNVNTTVK
EQAFTILCDVLLVFSHQMVSGGREQLEPLVYSPDDSLQTELLSFILHHVFIDQDDDNCST
DGQQDDEAAKIEALHKRRNLLAAYCKLIIYNVVEMNTGADIFKQYMRYYNDYGDIIKETM
SKTRQIDKIQCAKTLILSLQQLFHEMLSELGTGFDRSSSAFCGIKELARRFSLTFGLDQV
KTRDAIAMLHKDGIEFAFKEPSPQGEGNPPLHLAFLDILSEFSSKLMRQDKRTVHMYLER
FMTFQMALQRDDCWLPLISYRNSLQAGGDDDTMSVVSGYSSRGSSVRSKKTKAATPTATV
AAAKRKLPEAEDSSSSSTDMSWQHQSMQTPVMMPSPHLTSTMMRGPGDMREEAKRGRDDS
YMGVYALPSDSQQHPHPHTLPQTPQLHQTPIDYNTQVTWMLAQRQQEEVRQQQERAMNYA
KLRTNLQQAIRRGTGLMEEDEEPIVEDVMMSSEGRMEDLNEGMDFDTMDIDLPPSKNRRE
RSELKPDYFDPGSIMDESVLGVSMF
NT seq
3858 nt
NT seq
+upstream
nt +downstream
nt
atgatagcagcaccagagttaccgtcagagttccactatcctcaggattcggacacccgt
ttctcctcagacacagacttctctgaggctcctgatgtcagtatcaacccaaccaaagga
aagggggggaaaaaggggaagaaggcggcaggagagaagggtaaaggagggaagggagtg
gggggtgcagggaggatgaacggccactaccaggagaatggcatggagaacctgatgctg
ttcgaggttgtcaagatgggcaaaagcgccatgcagtctgtggtggatgactggattgag
gcgtataaaaacgacagggacatggctctgctagacctgatcaacttcttcatccagtgt
tctggctgtaaaggagtggtcagtggagagatgttccgaaacatgcagaactctgagatc
atcaggaggatgacagaggagtttgacgaggacagcggagactatcctctgaccatggca
ggtccactgtggaagaagtttaagggcagtttctgtgagttcattgctgtcttggtgaga
cagtgtcagtacagcatcatctatgatgagtacctcatggacacggtcatatcgctcctc
accggactgtcggactcacaggtccgagccttcaggcacaccagcaccctggcagccatg
aaactgatgacagccctggtgaatgtagctttgaacctgagcatcaacatggacaacaca
cagcggcagtacgagacagagagaaacaagaatgtcgccaagagagccaatgaccggcta
gagctactgctgcagaaacgcaaagagcttcaagaaaatcaggacgaaattgaaaacatg
atgaatgctatattcaagggtgtgtttgtacaccgatatcgtgatgcgatagcagagatc
agagccatcactatagaggagattggaatgtggatgaagctgtacagtgacgccttcctc
aacgacagctacctgaaatacgtaggctggaccatgcacgacaagcaaggcgaggtgcgt
ctgaaatgtttgacagcgctgcagggtctctactacaacagagaactgaacaccagactg
gagctgttcaccagccgcttcaaggaccgcattgtctccatgactttggacaaggagtat
gatgtcgcagtacaagcaataaaactgctcactctggtactacatagtacagatgaggta
ctgagcccggaggactgtgagagcgtctatcacctggtctactccgcccaccgaccggtc
gccatagcagccggggagttcctcttcaagaaactcttcagtacgcgggagccggaagag
gagggcgcccccaagaggagaggaagacaaagccccaacgccaacctcatcaaaactact
gttttcttcttcctggagagcgagcttcatgagcatgctgcgtacctggtggactctctg
tgggagagtggagcagacctactgaaggactgggagtgtatgaccagcctgctactggac
gaccctgtgccaggggaggaagccctgacagacagacaggagacggctctcatagagata
atgctgtgtacggtgcgccaggctgcagagtgccacccacccgtaggccgcggaactggg
aagagggtgatgacagcgaaggagaagaagacccagcttgatgacaggaccagaatgaca
gagctgtttgctgtgacattaccccctctgctggccaagtactccatagatacagagaag
gtgaccaacctgctgcagctccctcagttcttcgacctggatatctacaccacaggacga
ctagagaagcacttggaggcgttgctgcgtcagatcagggagatcgtggagaaacacaca
gacatagaggtgctggaggtgtgctcgaagacctaccacgctctctgcaacgaggagttc
accatctttaacagagtggacatcgccaggtcacagcttctggatgaaatggtggacaaa
ttcaacagactgctggaagacttcttacaagagggtgaggagcctgatgatgatgatgcc
taccaggtcctgtctactctcaagagaatcacagcattccacaatgcccatgacctgtcc
cagtgggatctgttcagcagtaacttcaagttgctcaacacgggtattgagaacggtgac
atgccagagcagatagtggtccatgctctacagtgtacccactacgttgtcctgtggcac
ctggccaaggtctcagagggcagccacagaaaggaggagctggtgagcctgaggaaacag
atgcggatgttctgtctgatgtgtcagcgttacctcaccaacgtcaacacaaccgtaaag
gaacaggcgttcaccatcctgtgtgatgtgttgctggtctttagtcatcagatggtctct
ggaggcagagagcagctggagcctctggtctacagtcctgatgactcgctacagacagaa
ctactgtccttcatactgcaccatgtctttatagaccaggacgatgacaactgcagcaca
gatggccagcaggatgacgaggcagcgaagatagaagctcttcacaagagacgtaacctc
ctggcagcctactgtaaacttatcatctataacgtagtagagatgaacactggcgctgac
atctttaagcagtacatgaggtattataatgactacggtgacatcatcaaggagaccatg
tctaagaccagacagatagacaagatccaatgtgccaagacactcatcctcagtctacaa
cagttattccatgagatgttgtcagagttggggacaggttttgaccgctcgtcctcagcg
ttctgtgggatcaaggagctggccagacgtttctctctcaccttcggtctggaccaggtc
aaaacacgagacgctatcgccatgctgcacaaggatggtatagagtttgcatttaaggag
cccagtcctcagggagagggcaaccctcctcttcacctggccttcctagacatcctctca
gagttttcctccaaactaatgaggcaggacaagaggactgttcacatgtatctggagagg
ttcatgaccttccagatggccctccagagagacgactgctggctaccgctcatctcctac
aggaactccctgcaggctggcggggacgatgacaccatgtctgtggtctccggctactcc
tccagagggtcgtcggtcagatccaagaagaccaaggctgctactcccactgctaccgtc
gctgcagccaagaggaaactccctgaagctgaggacagcagtagcagcagtacagatatg
tcgtggcagcaccagagcatgcagactcccgtgatgatgccctccccccacctcacctct
accatgatgagaggaccaggggacatgagggaggaggccaaacgggggagagacgacagc
tacatgggagtgtatgccctcccttcagactcccagcagcatcctcaccctcacacactc
ccgcaaaccccacaactccaccagacacccatcgactacaatacccaggtgacgtggatg
ctggctcagaggcagcaggaggaggttcgtcagcagcaggagagagccatgaactacgcc
aagctcagaaccaacctgcaacaggccattcggcgtggtacagggctgatggaggaggat
gaggagcctatcgtagaggatgtgatgatgtcgtcagagggtcgtatggaagacctcaac
gagggcatggactttgacaccatggacatcgacctgcccccctctaagaacaggagagag
agatcagagctgaaaccagactactttgaccctggttctatcatggacgagtctgtcctt
ggagtgtccatgttttaa
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integrated database retrieval system