Streptomyces atratus: C5746_18925
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Entry
C5746_18925 CDS
T07374
Symbol
dacB
Name
(GenBank) D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase
KO
K07259
serine-type D-Ala-D-Ala carboxypeptidase/endopeptidase (penicillin-binding protein 4) [EC:
3.4.16.4
3.4.21.-]
Organism
sata
Streptomyces atratus
Pathway
sata00550
Peptidoglycan biosynthesis
sata01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
sata00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
C5746_18925 (dacB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sata01002
]
C5746_18925 (dacB)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sata01011
]
C5746_18925 (dacB)
Enzymes [BR:
sata01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
C5746_18925 (dacB)
Peptidases and inhibitors [BR:
sata01002
]
Serine peptidases
Family S13: D-Ala-D-Ala peptidase C family
C5746_18925 (dacB)
Peptidoglycan biosynthesis and degradation proteins [BR:
sata01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
C5746_18925 (dacB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S13
Peptidase_S11
Peptidase_M17_N
Beta-lactamase2
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
AXE82899
UniProt:
A0A2Z5JRK8
LinkDB
All DBs
Position
complement(4173617..4175152)
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AA seq
511 aa
AA seq
DB search
MCARERGWSTVDEPVKRPSVNPLDKLSRLTRQASVIRLKGLNDRLFTAVSAGLGLALAAG
VVLAAGPWDSGQRKAERDWAAARSRTGGVHHEPGALSGPEPAPSAPAVLAPLSSVVDNAA
PDARDAPDDAAAALRATLGPLLKDPALGTVRTAVVIDTATDERLYGQGADTPMTPASTVK
IATAVAALSALGPDHRIATTVRASPDSRSIVLVGGGDPTLDKAALRALAADTARTLKDRG
VRTVRLTYDTSRYSGPARHPIGPNENIAPVSALMTDEGRLDSTDSGPAPRSDDPAGDAAR
TFGELLDDAGIATRSGPTAGRPAAKSRPVAEHLSAPLSALVERALTNSDNDIAEALARQT
ALAAGERADFDGGRRAVTAQLKKLHLPLKGANFADGSGLNRKDKVTAGLLAGLLARAADP
DHPELRPVLTGLPVAGFSGTLSGRFTQNSAGTGLIRAKTGTLTGVNTLAGTVVDRQGRLL
AFAFLASGTTSPSEAQSSLDALATSLAVRTR
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgctcgcgaaaggggctggtcaacggtggacgagccggtgaaaagaccgtcggtc
aatccgctcgacaagctgagcaggctcacccggcaggccagcgtgatcaggttgaagggg
ctgaacgatcggctgttcacggctgtctccgccggcctcggcctggcgctcgcagccggc
gtcgtccttgccgccggcccctgggactcgggtcagcgtaaggccgagcgggactgggcc
gccgcccggagccgcacaggtggcgtacatcacgaacccggcgcgctttccggaccggag
cccgcacccagcgccccggccgttctcgcgcccctctcctccgtcgtcgacaacgccgcc
ccggacgcccgagacgccccggacgacgcagcggccgccctccgcgccaccctgggcccg
ctgctgaaggaccccgccctgggcaccgtgcgtaccgccgtcgtcatcgacaccgccacc
gacgagcggctgtacggccagggcgccgacacgcccatgacacccgcctccaccgtcaag
atcgccaccgcggtcgccgccctgagcgcgctcggccccgaccatcgcattgccacgacg
gtccgggcgtcccccgattcccgcagcatcgtcctggtcggcggcggcgaccccaccctc
gacaaggccgccctgcgcgcactggccgccgacaccgcccgcaccctgaaggaccggggc
gtaagaacggtccgcctcacgtacgacacctctcgctactccggcccggcacggcacccg
atcggccccaacgagaacatcgcgcccgtcagcgccctgatgaccgacgagggcaggctc
gacagcaccgacagcggacccgccccacgcagcgacgaccccgccggtgacgccgcccgg
accttcggtgagctgctcgacgacgccgggatcgccacccggtccggcccgacggccggc
cggccggccgccaagtcccggccggtcgccgaacacctctcggccccgctctccgcactg
gtcgaacgggccctgaccaacagcgacaacgacatcgccgaggcactcgcccggcagacc
gccctggccgcgggcgaacgggccgacttcgacggcggccgacgggccgtcaccgcacag
ctcaagaagctccacctgccgctgaaaggtgcgaacttcgccgacggcagcgggctgaac
cgcaaggacaaggtcaccgccggactgctggccggcctcctcgcccgcgccgccgacccg
gaccaccccgaactgcgccccgtcctcaccggcctcccggtggccgggttcagcggcacc
ctcagcggccgctttacccagaattccgcaggcacaggcctgatccgcgccaagaccggc
accctcaccggcgtgaacaccctcgccggcacggtcgtcgacaggcagggccggctgctc
gccttcgccttcctggcatccggtacgacatccccgtccgaggcccagtcctccctcgac
gccctcgccaccagcctcgccgtccgtacccgatga
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