Streptomyces autolyticus: BV401_20595
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Entry
BV401_20595 CDS
T04980
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
sauo
Streptomyces autolyticus
Brite
KEGG Orthology (KO) [BR:
sauo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sauo03016
]
BV401_20595
Enzymes [BR:
sauo01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BV401_20595
Transfer RNA biogenesis [BR:
sauo03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BV401_20595
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
WcbI
Motif
Other DBs
NCBI-ProteinID:
AQA12492
UniProt:
A0A1P8XW96
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All DBs
Position
complement(5197558..5198142)
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AA seq
194 aa
AA seq
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MRLFAAVLPPDAAVAELAARVEALRALPGADGLRWTEREGWHFTLAFYGEVAEEVLPELH
TRLARAAHRHHPHELRLAGGGRFDDRVVWVGVDGDSEAMRRLADSAEAGGRRVGVPMDRH
RPYHPHLTIARARTRSAHHRPTTGLAPYVDGLADFASQEWTVGELSLVRSHPPDPGVPGR
QPRYEAIAAWPLGH
NT seq
585 nt
NT seq
+upstream
nt +downstream
nt
atgagactcttcgccgccgtgttgccgccggacgcggccgtagccgagctggccgcgcgg
gtcgaggcgctccgggcgctgccgggggcggacgggctgcgctggaccgagcgggagggc
tggcacttcacgctcgccttctacggggaggtggccgaggaggtgctgcccgagctgcac
acccggctggcccgcgccgcccatcggcaccacccccatgagctgcggctcgcgggcggc
ggccggttcgacgaccgggtggtgtgggtgggcgtcgacggcgacagcgaggccatgcgg
cggctggccgactccgcggaggcggggggacggcgggtcggggtcccgatggaccggcac
cgtccgtaccatccgcatctgaccatcgcccgtgcccgcacccgctccgcgcatcaccgc
cccaccaccggcctcgcgccgtacgtcgacgggctcgccgacttcgcgagccaggagtgg
accgtgggcgagctcagcctggtgcgcagccatccgccggacccgggcgtccccggccgg
cagccgcgttacgaggcgatcgcggcctggccgctgggccactga
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