Abyssicoccus albus: BVH56_05180
Help
Entry
BVH56_05180 CDS
T04690
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sbac
Abyssicoccus albus
Pathway
sbac03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbac00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
BVH56_05180
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbac03400
]
BVH56_05180
Enzymes [BR:
sbac01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BVH56_05180
DNA repair and recombination proteins [BR:
sbac03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
BVH56_05180
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
PriA_CRR
PIF1
AAA_30
AAA_19
SLFN-g3_helicase
EppA_BapA
nSTAND3
Viral_helicase1
TrwB_AAD_bind
AAA_22
DUF1258
Motif
Other DBs
NCBI-ProteinID:
AQL56350
LinkDB
All DBs
Position
complement(1000186..1002612)
Genome browser
AA seq
808 aa
AA seq
DB search
MFVEVIVDINHKQVDQLFTYRVPKFLEQQVTVGQRVIIPFGRQTKVGYVIRCVERLDDAQ
FNDPSKIKSIQALMDYEQVLTNELIELSRWMADTYITTRIGAIESMLPSALKVKYERLIF
MNPEHEVQMNLFSDALKDKFNASGHSGFKLSSIPLDSQLFKEIQQLLDEGVLIQESDIAQ
SLNKKKALSVQYIEQNIERLKGQKQIECYELIKSRPFDWWTYSDLKSHGFNRSVVKGLVD
KQFLEEGYVEVARDPFAHMDVLPTEKKQLNGEQQIVFDRISNDIVESKQQVHLLHGVTGS
GKTEVYLNLIEQALSLGKEAIMLVPEISLTPQMVERVKARFQDDVAVLHSALSAGEKYDE
WSKINKGIAKVSVGARSSIFAPFKKLGIIIMDEEHESTYKQQDHPRYAALDIAIERSKYH
DIPIVLGSATPRLETYVRAEHDVYTLNTLTTRANQQATLPDIHLIDLTKEFTVDPQMLFT
NPLLNSIKETLQKGEQCVLFLNRRGYSTHITCNECGHVPHCKHCDISLTYHHHSQSLKCH
YCNYEENKPHQCLSCYAQNSMELIGVGTERAAETLGELIPEAKIVRMDNDTTRKKGAHER
IFNQFGQGEYNVLIGTQMVAKGLDFPNVTFVGVLNADTQLNLPDFRASEHTFQLLTQVSG
RAGRADKAGQVYIQTFNPTHYAIKHVVSKDYLAFYQEEMAYRKMAKYPPYFYMTLIVIEH
DDMDVTLQHAHYIYQYIDQQMNKGCYLLGPTPSPVSKVKDKYRYQLLIKYKQQNQMNHIL
YQIDQQYRSLYQTDRIVVHIYINPDHFM
NT seq
2427 nt
NT seq
+upstream
nt +downstream
nt
gtgttcgtagaagtgattgtagatattaatcataaacaagtagaccagctctttacttat
cgtgttcccaaatttttggaacaacaagtcactgttggacaacgtgtcattattcctttc
ggtagacaaacgaaagtaggctatgtcatccggtgtgtagagcgactggacgatgctcag
tttaatgatccatcgaaaattaaatctattcaggcgttaatggattatgaacaagtatta
acgaatgagcttattgaattaagccgatggatggcagatacttatattacgactcgaatc
ggtgcgatagaatcgatgctaccaagtgcactgaaagtaaaatatgaacgattaatcttt
atgaatccagagcatgaagtacagatgaacttattttctgacgcattaaaagataaattt
aatgcatcaggtcattcaggatttaagctatcatctataccattagatagtcagttattt
aaggaaatacaacagttattagatgaaggggtattaattcaagaaagtgatatcgcacaa
tcattaaataagaaaaaagctttatccgtacaatatattgaacaaaatattgaacgactc
aaaggacaaaagcaaatcgaatgctatgaattgattaaatcacgaccatttgattggtgg
acgtattctgatttgaaatcacatggatttaaccgatcagtcgtgaaaggacttgtggat
aaacaatttcttgaagaaggttacgttgaagtagcacgtgacccatttgcgcatatggat
gtcttgccaactgaaaagaagcaattaaatggtgaacaacaaattgtatttgatcgaatt
tctaatgatatcgttgaatctaaacaacaagttcatttactccatggggtcactggaagt
ggtaaaactgaagtttatttgaatctaattgaacaagcattatcattaggcaaagaagcg
attatgcttgtgcctgagatatcattaacaccgcaaatggtagaacgagtgaaagcacga
tttcaagatgacgttgcagtcctccattcggcactgagtgcgggtgaaaaatatgatgaa
tggtctaaaattaataaaggcatagcaaaagtttctgtcggtgcaaggagtagtatattt
gcaccatttaaaaaattgggcattatcattatggatgaagagcatgaatcgacatataaa
caacaagatcatccaagatatgcagcgttagatattgcgattgaacgaagtaaatatcat
gacatccctattgtactcggttctgcaacaccaagacttgaaacgtacgttcgagctgag
catgacgtatatacattgaatacattgactactagagcgaatcaacaagcgacattgcca
gacattcacttaattgatttgacaaaagaattcaccgttgatccgcaaatgttatttaca
aatcctttacttaactcgattaaggaaacattacaaaaaggtgaacaatgtgtattgttt
ttaaatcgtcgtggttatagcacccatattacgtgtaatgaatgtggtcatgtccctcac
tgtaaacattgtgatatttcattaacatatcatcatcattcacaatcattgaagtgccac
tattgtaattatgaagagaacaaacctcatcagtgcctaagttgttatgcacaaaatagt
atggagcttataggtgtcgggacagagagagcagctgaaacattgggcgaattaattcct
gaggcaaaaattgtcagaatggataacgatacgactcgaaaaaaaggtgctcatgaaagg
atttttaatcagtttggacaaggtgaatacaacgtgttaattggcactcaaatggtagct
aaaggattagattttccaaatgtcacgtttgtcggtgtgttaaatgcagatactcaattg
aatttacctgactttcgagcgagtgaacatacatttcaattgctcacacaagtaagcggt
agagcgggcagagcagataaggcaggtcaagtctatattcaaacgtttaaccctacgcat
tatgcaattaaacatgttgtatctaaagattatttagcattttatcaagaagaaatggct
tatcgtaagatggcgaaatatccaccttatttttatatgacattgattgtcattgaacat
gatgatatggatgtgacattacaacatgcacattatatatatcaatatattgatcaacag
atgaataaagggtgttatttactcggaccaactcctagtccggtatctaaagtaaaagat
aaataccgttatcaacttttgatcaaatataagcagcaaaatcaaatgaatcacatatta
tatcaaattgatcagcagtatagatcactttatcaaactgaccgaattgtggtacatata
tatatcaatccggatcattttatgtag
DBGET
integrated database retrieval system
