Sphingobium fuliginis KK22: H5V43_05280
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Entry
H5V43_05280 CDS
T06985
Name
(GenBank) HU family DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
sbar
Sphingobium fuliginis KK22
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbar03032
]
H5V43_05280
03036 Chromosome and associated proteins [BR:
sbar03036
]
H5V43_05280
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_05280
DNA replication proteins [BR:
sbar03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
H5V43_05280
Chromosome and associated proteins [BR:
sbar03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
H5V43_05280
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
H5V43_05280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_bac_2
HU-CCDC81_euk_2
HU-CCDC81_euk_1
DUF2267
GTP_EFTU_D2
DUF937
Glyco_transf_29
Motif
Other DBs
NCBI-ProteinID:
QOT72545
UniProt:
A0A292ZEG0
LinkDB
All DBs
Position
1:1125318..1125590
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AA seq
90 aa
AA seq
DB search
MNKQDLISAVAESSGLSKSDASKAVEGVFDAITGALKKGDEVRLVGFGTFSVSQRKASTG
RNPRTGETMTIKASAQPKFKAGKGLKDSVN
NT seq
273 nt
NT seq
+upstream
nt +downstream
nt
atgaacaagcaggatcttatcagcgcagtcgctgaaagcagcggcctttccaagagcgac
gccagcaaggccgtcgagggtgttttcgacgccatcaccggagccctgaagaagggggat
gaggttcgtctggtcggtttcggcactttctccgtttcgcagcgcaaggcctcgaccggc
cgcaacccgcgcacgggcgagacgatgacgatcaaggcttcggcccagcccaagttcaag
gccggcaagggcctgaaggactcggtcaactaa
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