Sphingobium fuliginis KK22: H5V43_07680
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Entry
H5V43_07680 CDS
T06985
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sbar
Sphingobium fuliginis KK22
Pathway
sbar03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sbar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
H5V43_07680
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbar03400
]
H5V43_07680
DNA repair and recombination proteins [BR:
sbar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
H5V43_07680
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Paralog
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
QOT72968
UniProt:
A0A292ZDK9
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All DBs
Position
1:complement(1630852..1631754)
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AA seq
300 aa
AA seq
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MAARAYWQGQIRLALVSIPVEIYAATKSGAQIAFHQIHQPSGKRVRYEKTVPGLGPVDPE
DIVKGYELSKGDYVLLQPDEIDAVKLESKKTLELTQFVDASEIDVLYYERPYYVVPADDL
AEEAFIVLREALRRTKKVGLGQLAMRGREYIVSLKPCGRGMVLETLRYADEVNRAQSYFR
DIEDAKPDAELLDLAETLIEKKTAPFKPDSFHDRYVDALERLIEKKKKSKGRRVIEEEEE
GAAPRGSNVIDLMAALKKSVGSGAASSAAKPAAKKAPAAKAPAKATTRKTPAKPASRKRA
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atggccgctcgcgcatattggcaggggcagattcgtctggcgctggtatccattccggtg
gagatctatgccgccaccaagtccggcgcgcagatcgccttccaccagatacaccagccc
agcggcaagcgcgtccgttatgaaaagaccgttccgggcttgggtccggtcgatccggag
gacatcgtcaagggctatgagctgtccaagggcgactatgtgctgcttcagcccgatgag
atcgacgcggtgaagctggagagcaagaagacgctcgaactcacccagttcgtcgacgcc
agcgagatcgatgtcctctattatgagcggccctattatgtcgtgcccgccgacgacctg
gcggaggaagccttcatcgtcctgcgggaggcgctgcggcggacgaagaaggtcgggctg
ggccagcttgccatgcggggccgggaatatatcgtctcgctgaagccttgcggccggggc
atggttctggaaacgctgcgctatgccgatgaggtgaaccgcgcccagagctatttccgc
gacatagaggatgcaaagcccgatgcggagctgctcgaccttgccgagacgctgatcgag
aagaagaccgcgccgttcaagcccgacagcttccacgaccgctatgtggacgcgctggaa
aggctgatcgaaaagaagaagaagtcgaagggccgccgcgtcatagaggaggaagaggag
ggcgcggctccgcgcggcagcaatgtgatcgacctgatggcggcgctcaagaagtcggtc
ggttccggcgcggcttcttccgccgcgaaaccggcggcgaagaaggcgcctgccgccaag
gcgcccgccaaggccacgacgcgaaagacccccgccaagccggccagccgaaaacgggcc
tga
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