Shewanella baltica BA175: Sbal175_2398
Help
Entry
Sbal175_2398 CDS
T02014
Name
(GenBank) SicP binding domain protein
Organism
sbb
Shewanella baltica BA175
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SicP-binding
Snapin_Pallidin
HetR_C
Motif
Other DBs
NCBI-ProteinID:
AEG11649
UniProt:
G0B1C0
LinkDB
All DBs
Position
complement(2843329..2847375)
Genome browser
AA seq
1348 aa
AA seq
DB search
MALDINAFSHSAKLDDRLTLVDTPEGIPTIIAAKEGFKEKLLSMLSHIPLLKNTQAVQDY
VNGLSLDNKQVLGVFLQALAARFGHDAALDIVDAVDLSGHTPLTLRTIEQLTERSEAFAP
LHLPLDICETDEDAPKLLVLPSPIAIESESSEKQTPSLSELTPLTDPIAVAKGISGTASH
TLNQQPIAPQDFLHAQDQCLKQLLTTPIPQKITMPTTQTWLASWVYSEPEPIKTLQQAIK
YYNQVLSDTQLATCIQNLNQSRDPLITSDELTAQRELVTTALAKVKQALTLVAELNANLS
VEQSGVLSPLLAEVNLGLSQYEVLTAAMQTYEQALLASNPVRQALSEFHAALPYALQNKL
TADTLVSSYQLFSPLMQTELGQTERVEYLAASLVSMLNEENISAVSEQKKMMPEVKSLVL
LIKQFVLEPMQEPLAVSSSFQTPFEAQQAEAEQYLTQIEQAQTLLADCLARASKLSGEAL
ITVGKQVQLEDHLAAVKQAGARLSTVLYKAINPVEEEVQVDDLTATLLYLGGQEYVEKGS
RLQFDEPVHFDDLALELTLRNELDGSTFAPQVASLAQQVLQTQHHLNWFEGVSSISFSPN
NSQDISLFDDVNNLRLVSQIEQDQTRYHSFLTERLSLCNDYHRAVTELLLAVPSETVRNQ
LSQELVHINADQDATRTLVERLNRLQSAQDVLVVAGNNIAKLSALTQQLEHVRRETNAER
AAVNQSYFLSYLPELNNNNEQVRALTQEQHLLSAKLDKLTEHLQQLYGDGLVQTLAEPEA
SSPELRAFRTVTSQLAEVNRSLEELDDAYQHGLLQLKKATIAAKNNGGFPEQGGMASSHA
WQSWLVQKFVGNWSSQYRPSLEELILSRQLAKNNMSSVAEAYLALASSVKASKTSLVNVS
VLTSPKVMVAALGDLHNWSMAHPIEARELAGNLTQAYNIILANPGTFGQELVNTITTVWQ
TGTVQNQVHDILQGKREELPDKTNFAMTPQMIALLHMAQLAPYIAGGAKGAANTGIGGPL
VSGVFGMMFPSAGIATPVVGLVGGILQTWSERQLANNMREYRSSEVMVNALIKGMQAEGG
LSARGEAIAGYMLQRQALQDVGTVARDCFEVGKVGAVKRAFTDIANWWKHASTGAKALAV
VMTIVAASVVSVGAIAAAVFTLGTGGVGIVSAVVLGLGGLMAGAYSSKAVVSTLQGANFL
GMADTARAAEAEMTEKRIEQAFAQLAHTPVSQATVIKTTALSASGTQEIPKSMADVLGLE
QHQSVLKAHFLPQLVGLDSDAQQAIFVQGMRQYANDKSHEIEINQAIDRDKTVERAMKWV
AELDIMPAQLQQCMAEIDAALLTEISSR
NT seq
4047 nt
NT seq
+upstream
nt +downstream
nt
atggccttagatattaatgcatttagtcattccgctaagcttgacgaccgtcttacctta
gtcgatacccccgagggcataccgacgattatagcggccaaagaaggctttaaagaaaaa
ttactgagcatgcttagccacattcctttactcaaaaatacccaagcggtccaagattat
gtcaatggcttatcactcgataataagcaagtgttgggcgtgtttttgcaggcattggcg
gcaagatttggtcatgatgctgcactggatatagtcgatgccgtcgatttgtccgggcat
actccattaaccctgcgcacgatcgaacaactcaccgagcggagtgaggcatttgcgcct
cttcaccttcctttagacatatgtgagactgatgaagatgcgcccaaattgcttgtctta
ccttcccctatcgcgattgagtccgagtcgtcggagaagcaaacgcccagcctctcagag
cttacacctttaacagatcccatagccgttgctaaaggcatcagtgggacggcttcccat
actttaaaccagcagcctatagcgccacaggattttttacatgcacaggatcaatgtctt
aaacagttgttaaccacaccaataccacaaaaaataactatgccgaccactcaaacttgg
ctggcttcttgggtgtattcagaacctgaacccattaaaaccttacaacaagccattaaa
tattataatcaagtactcagtgacactcagctcgcaacatgtatacaaaacttaaatcag
agtcgagatcccttgattaccagcgatgaactgactgcgcagcgagagcttgtcacaact
gcgctagcaaaagttaagcaggctttaactctagtcgctgagttgaacgcgaatttgtcg
gtggaacagagcggtgtcctgtcgccactactggccgaagtcaatctgggattatcgcaa
tatgaggtcttaacggcggcaatgcagacatatgagcaagccttattagcatcgaacccg
gtgcgccaagccttatctgagtttcatgccgcgcttccctatgcactacaaaacaagcta
acagcggataccttagtgagcagttatcaactgttttcccctttgatgcaaactgaatta
ggtcagacagagagagtagaatacttagcggcaagcttagtctctatgctcaatgaagag
aacatcagcgcggtttctgagcaaaaaaaaatgatgcctgaggtcaaaagcttagtatta
ctcattaagcagtttgtgctagaacccatgcaagaacccctggccgtaagttcgtcattt
cagactccatttgaagcacagcaggccgaagccgaacagtatttaactcagatcgaacaa
gcacaaaccttactggccgattgccttgcacgggccagtaagctcagtggagaagcgctc
atcactgtcggtaagcaagtgcaactcgaagatcatttagcggcagtgaaacaggcggga
gctcgactcagtactgtattatataaggctatcaacccagtcgaagaagaggtccaagtc
gatgatctcaccgcaacattactgtatcttggcggacaagagtatgtcgagaaaggcagt
cgtttgcagttcgatgagccagttcactttgatgatctcgcccttgagctaacgctaaga
aatgagctagatggcagtacttttgccccccaagtggcaagcttagcgcagcaagttcta
caaactcagcatcatcttaattggtttgagggcgtaagctccatcagctttagcccaaat
aattcacaagatatttcactgtttgatgatgttaacaacctgcggctagtttcgcagatt
gagcaagatcaaactcgttatcacagttttcttaccgaacgtctttccctgtgtaatgat
tatcatcgagccgtgactgagctgctgttagctgttccctctgagacggtgcgtaatcag
ctatcccaagaactcgtgcacattaatgcggaccaagatgcgacccgaactttagtcgag
cgactcaatcgactgcagagtgcacaagacgtgttagtggttgcgggtaataacatcgct
aaattgtcggcgttaacccagcaacttgagcatgtaaggagggaaacaaatgctgaacgt
gctgcggtgaatcagagttatttccttagctatctacctgaattaaataataataatgaa
caagtgcgcgccttaactcaagagcagcatctcttatcggccaaactggacaaattgacc
gaacatttacagcaattatatggcgatggcctagtacaaaccttagccgaaccagaggcc
agttcccctgaactgcgcgcttttcgcactgtgactagccagctagcggaagtcaatcgc
tcccttgaagaactcgatgatgcttaccaacatggtttgttacagctgaaaaaggccact
atcgcagcaaaaaataatggcggctttccagaacaagggggtatggcgagtagccatgca
tggcaaagttggttagtgcaaaagtttgtcggcaattggtcttcccaatatcgcccaagt
ttagaagaacttattttatctaggcaactggctaaaaataacatgagcagtgtcgccgag
gcttatctcgctttagcctcaagtgttaaagcctcgaaaacgagcttagtaaatgtgtct
gttttaacctcgcccaaggtcatggtggcagcactgggcgacctgcataattggtctatg
gcacacccgatagaggcacgtgagctcgcaggcaatttaactcaagcctacaatattatt
ttggctaacccaggtacctttgggcaggaactggttaacactatcaccacagtgtggcaa
accgggacagtacaaaaccaagtgcacgatattctgcaaggtaagagagaagagctaccc
gataaaacgaatttcgctatgacaccgcaaatgattgcgttattacacatggcacagtta
gcaccgtatattgcaggtggggcgaaaggggctgctaatacaggcataggtgggccttta
gtcagtggtgtatttgggatgatgtttcccagcgcagggatagcaacacctgtcgtcggc
ttagttggcggcatcctgcaaacctggtccgaacgtcagcttgccaataacatgcgtgag
tatcgcagcagtgaagtcatggtgaatgctttaattaaaggtatgcaggcagaaggcggg
ctgagtgctcgtggcgaggccattgctggctatatgctacagcgacaggctctgcaagat
gttggtactgtcgcccgtgattgttttgaagtcggtaaagtaggcgcagtcaagcgtgca
ttcacagatatcgccaattggtggaaacatgcttcaacgggagccaaagccttggctgtg
gtgatgacaattgtggcagcctctgtggtatcggtgggagcgatcgcggcggcagtgttt
accttagggactggcggcgtaggtatagtgtcagccgtggtgcttggcttgggaggatta
atggctggcgcctattcttccaaggctgtggtgtcgacattgcaaggggctaatttttta
ggcatggccgatactgcccgcgcggccgaggctgaaatgacagaaaaaaggatcgagcaa
gcatttgcgcaattggctcacactcctgtatctcaagccacagtcattaagacgacggcc
ctcagtgcatcaggcacccaagaaatccctaaatcgatggcggatgtactggggcttgaa
cagcatcaatctgtgctaaaagcacattttctgccgcaattagtcggcctcgatagtgat
gcgcagcaggccatatttgttcagggcatgcggcaatacgccaatgataaaagccacgaa
atagaaataaatcaagcaatagacagagataaaaccgtcgagcgagccatgaaatgggta
gctgaactggacataatgccagcgcaattacagcaatgcatggcagaaatcgatgcggcc
ttattgacggagatctcgtctcgataa
DBGET
integrated database retrieval system
