Shigella boydii CDC 3083-94 (serotype 18): SbBS512_E2210
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Entry
SbBS512_E2210 CDS
T00700
Name
(GenBank) LysM domain/ErfK/YbiS/YcfS/YnhG family protein
KO
K19236
L,D-transpeptidase YcfS
Organism
sbc
Shigella boydii CDC 3083-94 (serotype 18)
Pathway
sbc01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sbc00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
SbBS512_E2210
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
sbc01002
]
SbBS512_E2210
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sbc01011
]
SbBS512_E2210
Peptidases and inhibitors [BR:
sbc01002
]
Cysteine peptidases
Family C82
SbBS512_E2210
Peptidoglycan biosynthesis and degradation proteins [BR:
sbc01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
SbBS512_E2210
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
ACD07241
UniProt:
B2U508
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All DBs
Position
2011324..2012286
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AA seq
320 aa
AA seq
DB search
MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIA
KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPTGK
NSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANTRARYKAQGIELPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNI
INTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVM
DVRSGMPVDVRRHQVSPQTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgatgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtg
gcgctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctg
gttggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgcc
aaaaaatataacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttac
gtaccgcgcgcgggcagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccg
cgcgaaggcattgtgatcaacattgcggagctgcgtctctattactacccgacgggtaaa
aattcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccg
acaatggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaac
acccgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccg
gataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgctt
catggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctg
cgggatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatc
atcaacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacat
cagccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagc
gcaatgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatg
gatgtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctg
taa
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