Sphingobium baderi: ATN00_09515
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Entry
ATN00_09515 CDS
T04194
Name
(GenBank) glycine dehydrogenase
KO
K00283
glycine cleavage system P protein (glycine dehydrogenase) subunit 2 [EC:
1.4.4.2
]
Organism
sbd
Sphingobium baderi
Pathway
sbd00260
Glycine, serine and threonine metabolism
sbd00630
Glyoxylate and dicarboxylate metabolism
sbd00785
Lipoic acid metabolism
sbd01100
Metabolic pathways
sbd01110
Biosynthesis of secondary metabolites
sbd01200
Carbon metabolism
Module
sbd_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
sbd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
ATN00_09515
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
ATN00_09515
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
ATN00_09515
Enzymes [BR:
sbd01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
ATN00_09515
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Motif
Pfam:
GcvP2_C
Aminotran_5
GDC-P
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
ALR20507
UniProt:
A0A0S3EYP1
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Position
1912609..1914180
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AA seq
523 aa
AA seq
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MTMLKEGRPTAPQAVAEEHVAPATATGNRALMLEEPLIFEIGSADTTGVDFAEVPKVKSR
FGNLARKDAIGLPGLSEQETVRHYTRLSRQNYAIDLGLFPLGSCTMKHNPRLNEKVARMP
GFADLHPLAPQSTVQGALAVIHELAQWLVTLTGMHSVAMSPKAGAHGELCGLLAIRAALE
ARGDARSVVLVPESAHGTNPATAAFCGYKVEDIPATPDGRVDLEALKSRLGPDVAAVMIT
NPNTCGLFERDMKTISDAVHAAGAFVYCDGANFNAIVGRVRPGDLGVDAMHINLHKTFST
PHGGGGPGSGPVVLSQALAPFAPLPFVEKQGDRFVLVEEESVEDHHGGSFGRMVAFHGQM
GMFTRALAYILSHGADGLRQVSGDAVLNANYILRSLSDVLDAPFGGSGPCMHEALFSDKG
LAEGFTTLDIAKGLIDEGFHPMTMYFPLVVHGAMLVEPTETESKAALDQFIMALRSLAER
AKAGDEALKGAPYHAPRRRLDETLAARKPVLVWTEPELAEAAE
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgaccatgctcaaggaaggccgtcccaccgcgccgcaggctgtcgcggaagaacatgtg
gctccagcaacggccaccggtaaccgcgcgctgatgctggaagagccactgatcttcgag
atcggatcggcagacacgaccggcgtcgatttcgccgaagtgcccaaggtgaagagccgt
ttcggcaatctcgcccgaaaggacgccatcggcctgccgggcctgtcggaacaggagacg
gtgcgtcactatacgcgcctcagccgtcagaattacgcgattgaccttggtctgttcccg
cttggctcctgcacgatgaagcataatccgcgcctcaatgaaaaggtcgcgcggatgccg
gggttcgccgatctccacccgcttgcgcctcaatcgacggtgcagggcgcgctggcggtg
atccatgaactcgcgcaatggcttgtcaccctgaccggaatgcacagcgttgccatgagc
cctaaggcgggcgcgcatggagagctctgcggcctgcttgccatccgcgccgctctggag
gcacgcggcgacgctcgctcggtcgtgctggtgcctgaaagcgcgcatggcaccaatccc
gcgaccgctgccttctgcggctataaggtggaggatattcccgcgacgccggatggccgc
gtcgatctggaagcgctcaagtcccgcctcggcccggatgtggcggcggtgatgattacg
aaccccaatacctgtggtctgttcgagcgcgacatgaagacgatctccgacgcggttcat
gcggccggagcctttgtttattgcgacggcgccaacttcaacgccatcgtcggtcgggtt
cgtcccggcgaccttggcgtcgatgcaatgcacatcaacctgcacaagaccttctccacg
ccccatggcggcggtggccccggttccggtccggtggtgctgtcacaggcgcttgcgccc
ttcgcgccattgcctttcgtcgaaaaacagggtgaccgcttcgtgctggtagaggaagaa
tcggtcgaggatcatcatggcggcagctttggccgcatggtcgctttccatggccagatg
ggcatgttcacccgcgcgctcgcctatatcctgagccatggcgcagacggcctgcgtcag
gtgtcgggcgatgcggtgctgaacgccaactacatcctacgcagcttgtcagacgtgctg
gacgccccctttggcggcagcgggccctgcatgcacgaggccctgttcagtgacaaggga
ctggcggaaggtttcaccacgctcgacatcgccaaggggctgatcgacgaaggcttccat
ccgatgaccatgtatttcccgctggtcgtccacggcgcgatgctggttgagccgaccgaa
accgaaagcaaggcggcgcttgaccagttcatcatggcgctgcgtagtctggctgaacgg
gccaaggccggggatgaggcgctgaagggcgcgccttatcatgctccgcgccgccgtctg
gacgaaacgctggccgcacgcaagccggtgttggtctggaccgaaccggaactggcggaa
gccgctgaatga
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