KEGG   Sphingobium baderi: ATN00_21490
Entry
ATN00_21490       CDS       T04194                                 
Name
(GenBank) excinuclease ABC subunit B
  KO
K03702  excinuclease ABC subunit B
Organism
sbd  Sphingobium baderi
Pathway
sbd03420  Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:sbd00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03420 Nucleotide excision repair
    ATN00_21490
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sbd03400]
    ATN00_21490
DNA repair and recombination proteins [BR:sbd03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     ATN00_21490
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    SHDIR (short-homology-dependent illegitimate recombination)
     Supressor
      ATN00_21490
SSDB
Motif
Pfam: Helicase_C UvrB_inter UvrB ResIII DEAD AAA_22 UB2H AAA_30 DUF87 PAC2 Kinesin
Other DBs
NCBI-ProteinID: ALR23069
UniProt: A0A0S3F677
LinkDB
Position
pDE2:42192..44168
AA seq 658 aa
MSTDVFILHSQYTPAGDQPEAIARLIAGVEEGAHHQTLKGITGSGKTFTMANIIHRLKRP
TLILAPNKTLTSQLYDEMRRFFPENAVEYFVSYYDYFQPEVYLPGRDEFIPKDSSINEHL
ERLRLSTTKSLIERRDTIVVASVSSIYGMGDPDNYRALQVPLTEGARLGQEELFRSLARL
QYDRAEHKLKRGTYRADGDAVEIYPADSEYKALRVGLANGVIASLQWFDAATGKPMESAD
HYLVSPKTVLAATADQARKAATAILEELETQVERLTSENRLTEAARLYDRITNDAEMLRE
VGYCSGMENYACYLSGRDPALPPITLLDYLPKDGLLFVDESHVMIPQISAMFRGDQARKD
TLIDYGFRLPSSKDSHPLSFHEFEQVKPQTIFVSATPGAYEVKASQGRVVEQIVRPTGLL
DPKVEVRPSQGARDDLLREIAQRTQRDERVLVTTLTKVATEELHAFLESEGIRARYMHSD
IKVEDRVAIIEGLRVGEFDVLIGISLLREGLDIPEASLIAIFDADRAGFLRSAQALIQMI
GRVARNVNGTAVLYADMVTPAMRAAIDETESRRQRQIAFNEENDVTPLSSVRGLASAQPY
GQEPSVHSEAFCENLYELCDRITEKEQALLAAVDHGQEDRAETIRGELDGLYRQFIYL
NT seq 1977 nt   +upstreamnt  +downstreamnt
gtgtcgaccgatgttttcatactgcactcgcaatacacgccggcaggcgatcagcccgaa
gcgatcgcgcgcctgatcgccggcgtcgaagagggggcacatcaccagaccctcaagggc
atcacgggctcgggcaagaccttcacgatggcgaacatcatccatcgtctgaagcgcccc
accttgatccttgcccccaacaagacgctgacatcgcagctctatgacgagatgcggcga
tttttccctgaaaacgccgtggagtatttcgtctcctattacgactatttccaaccggaa
gtgtatctgccgggccgcgatgagttcattccgaaggattcctcgatcaacgagcatctg
gaacggttgcgcctgtcgacgacaaaatcgctgatcgagcgccgcgatacgatcgtcgtc
gcctcggtatcgtcgatctacggcatgggcgatcccgacaattatcgcgcgctccaggtt
ccgctgaccgagggcgcgcggttgggacaggaagagcttttccgcagcctggcgcgcctg
caatatgatcgggccgagcataagctgaagcgcggcacttatcgcgctgatggcgacgct
gttgagatttacccggcggattcggaatataaggcgctgcgcgtcggtttggcaaacggc
gtgatcgcgtcgctccaatggttcgatgcggcgaccggcaagccgatggaaagcgccgat
cactatcttgtctcgcccaagactgttctggcggcgaccgcagatcaggcccgcaaggcc
gccacggcgatcctcgaagagttggaaacgcaggtcgaacggctgaccagcgaaaaccgc
ctgacggaagcggcgcgcctctatgatcgcatcaccaacgatgccgagatgttgcgcgag
gtcggatattgctcgggcatggaaaattacgcctgctatctgagcggtcgtgaccctgcg
ctcccgcccataaccctgctcgactatctgcccaaggacgggctgctgttcgtcgacgaa
tcgcatgtgatgatcccacagatctcggcgatgttccggggcgaccaggcccgcaaggat
acgctgatcgattatggcttccgcctgccgtcttcgaaggacagccaccccctgagcttc
cacgagttcgaacaggtcaagccgcagacgatcttcgtgtccgccacccccggcgcttat
gaggtaaaggcctcgcaaggcagggtggttgaacagatcgtgcggccgaccggcctgctc
gatccgaaggtggaagtccgcccgtcccaaggcgcgcgtgacgatttgctacgcgagatc
gcgcagcgcacgcagcgcgatgagcgcgtgctggttacgacgctgaccaaggttgcgacc
gaggagctgcacgctttcctcgaaagcgaaggcattcgcgcgcgttacatgcactctgac
atcaaggtcgaggatagggtcgcgatcatcgagggcctgcgcgtgggcgagttcgacgtg
ctgatcgggatcagtttgctgcgcgaagggctcgacatcccagaagcgtcgctgattgcg
atcttcgatgcagaccgcgcgggcttcctgcgctcggcccaggcgctgatccagatgatc
ggccgcgtcgcgcgcaatgtgaacggcaccgctgtcctctacgccgatatggtgacgccg
gcgatgcgggccgcgatcgatgagaccgagagccggcgacagcgccagatcgccttcaac
gaggagaacgacgtcacaccgctctcgtcggttcgcggcctggcgtcggcgcagccctac
gggcaagagccgtcggtccattcggaagccttctgcgagaacctgtacgagctttgcgac
cggatcacggagaaggaacaggcgctgctcgcggcggtggatcacggccaagaggatcgg
gccgagacgatccggggcgagctggacggcctctaccgtcagttcatttatctgtga

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