Salmonella bongori NCTC 12419: SBG_1943
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Entry
SBG_1943 CDS
T01579
Symbol
alkA
Name
(GenBank) DNA-3-methyladenine glycosidase II
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
sbg
Salmonella bongori NCTC 12419
Pathway
sbg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
SBG_1943 (alkA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbg03400
]
SBG_1943 (alkA)
Enzymes [BR:
sbg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
SBG_1943 (alkA)
DNA repair and recombination proteins [BR:
sbg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
SBG_1943 (alkA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CCC31006
UniProt:
A0A0K0HCA6
LinkDB
All DBs
Position
complement(2111698..2112567)
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AA seq
289 aa
AA seq
DB search
MFTLSWQPPYDWSWMLEFLAARAVDGIETVGEGFYARSLVVGEHRGLVSVRPHQPTHTLQ
ITLSAGLLPVAPVCLAKISRLFDLDCQPAEIAATLGALGEARPGLRLPGSVDTFEQGIRA
ILGQLVSVAMAAKLTAKVARCYGEALPDAPGYVCFPGPETVALADPLTLKALGMPLRRAE
ALIYLAQATLAGKLAFTAPSDIEQSVKNLQTFPGIGRWTANYFALRGWQAKDIFLPDDYL
IKQRFFGMTPAQIRRYAERWKPWRSYALLHIWYTHGWQPSMDSEIAGIQ
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgtttaccctgagctggcagccgccgtatgactggtcgtggatgttggaatttcttgcc
gcacgtgcggtggacggcatagagaccgtgggcgagggcttttatgcgcgcagtctggtg
gtgggcgagcatcgcgggctggtaagcgtgaggcctcatcagccgacccacacgttacaa
attacgttgagtgcgggtttgcttcctgtcgcgccggtgtgtctggcgaagatctcgcgt
ctgtttgatcttgactgccagcccgcggagatcgccgctacgctgggagcactgggcgag
gccagaccggggctgcgtttaccgggatcggtcgatacgtttgaacaaggcatacgggcg
atactggggcaactggtgagcgtcgcgatggccgcaaagctgacggcaaaggtggcgcgc
tgctatggcgaggccctgccggatgcacccggatatgtctgttttcctgggccggaaacg
gtggcattggccgatccgctgacgttgaaagcgctggggatgccgcttcgacgtgccgaa
gcgctaatttatctggcgcaggcgacgctggcgggaaaacttgcttttaccgcgccgtcg
gatattgagcagagcgtgaagaatttgcaaacttttccaggtattggccgctggacggcg
aactatttcgctttgcgcggctggcaggcaaaagacatttttttacctgatgattactta
attaagcagcgattttttgggatgacgcccgcgcagatccggcgttatgcggagcgctgg
aaaccgtggcgttcctatgcgctcctacacatctggtatacccacggttggcaaccgtca
atggatagcgaaatagctggtattcagtag
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