Salmonella bongori NCTC 12419: SBG_2580
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Entry
SBG_2580 CDS
T01579
Symbol
yqcB
Name
(GenBank) putative RNA pseudouridylate synthase
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
sbg
Salmonella bongori NCTC 12419
Brite
KEGG Orthology (KO) [BR:
sbg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
sbg03016
]
SBG_2580 (yqcB)
Enzymes [BR:
sbg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
SBG_2580 (yqcB)
Transfer RNA biogenesis [BR:
sbg03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
SBG_2580 (yqcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
CCC31631
UniProt:
A0A0K0HE33
LinkDB
All DBs
Position
complement(2828415..2829197)
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AA seq
260 aa
AA seq
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MLEILYQDPWLVAVNKPAGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGV
LLMGLSSDAGRRLAQQFEQHRIHKRYHAIVRGWLMDDAVLDYPLVEERDKIADKFAREDK
APQPAVTHYRGLATVEMAVPTGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSK
HGDLRQNRNAAEHFDCRRLMLHASRLELVHPFTGQPLIIQAGLDETWMQALTQFGWRGLL
PGNERVEFTTASRQDESHQA
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgctggagattctttatcaggacccgtggttggttgccgttaataaacccgcaggctgg
ctcgttcaccgcagttggctggatcgcgacgaaaaagtggtggtcatgcaaacggtacgc
gaccaaatcggccagcatgtttttaccgctcaccgtctcgacaggcccacttcgggcgta
ctgttgatggggctttccagcgacgcaggacgccgcctggcgcaacagttcgaacagcac
cgcatccataaacgctaccatgccattgtccgcggctggctgatggatgacgcggtgctg
gattatccgctggtggaagaacgggataaaatcgctgataagtttgcgcgcgaggataaa
gctccccagccggccgtaacgcactatcgcgggctggcgacggttgaaatggcggtaccg
accgggcgttatcctaccacgcgttatggcctggttgagctggagccgaaaacaggacgc
aaacaccaactccgtcgccatttggcgcatctgcgtcatcctatcatcggcgacagtaaa
catggcgacttgcggcagaaccgcaacgcggcagaacattttgactgtcgtcgcctgatg
cttcatgccagtcggcttgagctggtgcatcccttcaccgggcaaccattgattattcag
gccgggctggatgaaacctggatgcaggcgcttacccagtttggctggcggggacttctc
cctggcaatgaaagggttgagtttacgacggcgtcccggcaggatgagtctcatcaggca
taa
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