Sorghum bicolor (sorghum): 8054237
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Entry
8054237 CDS
T01086
Name
(RefSeq) peptidyl-prolyl cis-trans isomerase CYP65
KO
K10598
peptidyl-prolyl cis-trans isomerase-like 2 [EC:
5.2.1.8
]
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04120
Ubiquitin mediated proteolysis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04120 Ubiquitin mediated proteolysis
8054237
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
sbi03041
]
8054237
03110 Chaperones and folding catalysts [BR:
sbi03110
]
8054237
04121 Ubiquitin system [BR:
sbi04121
]
8054237
Enzymes [BR:
sbi01000
]
5. Isomerases
5.2 cis-trans-Isomerases
5.2.1 cis-trans Isomerases (only sub-subclass identified to date)
5.2.1.8 peptidylprolyl isomerase
8054237
Spliceosome [BR:
sbi03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
8054237
Complex C
U4/U6.U5 tri-SnRNP related factors
8054237
Other splicing related proteins
Minor spliceosome components
Minor spliceosome associated proteins
8054237
Chaperones and folding catalysts [BR:
sbi03110
]
Protein folding catalysts
Peptidyl prolyl isomerase
Cyclophilin
8054237
Ubiquitin system [BR:
sbi04121
]
Ubiquitin ligases (E3)
U-box type E3
8054237
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pro_isomerase
U-box
zf-NOSIP
Rtf2
RPA43_OB
Motif
Other DBs
NCBI-GeneID:
8054237
NCBI-ProteinID:
XP_002465688
UniProt:
A0A921S566
C5WTU1
LinkDB
All DBs
Position
1:74000486..74004042
Genome browser
AA seq
591 aa
AA seq
DB search
MGKKQHSKDRMFITRTEWATEWGGAKQKDVGTPFKRLPFYCCSLTFLPFEDPVCTVDGSV
FDLMSIVPYLKKFGKHPVTGAPLKHEDLIPLTFHKNSDGEFQCPVLNKVFTEFTHIVAVK
TTGNVFCYEAIQELNIKPKNWKELLTDEPFTRNDLITIQNPNVVDGKVLGEFDHVKKGLK
LEDEELQRMKDDPTYNINISGDLKQMIKDLGTEKGKEAFLQGGGGLKAQKERAAALAAIL
ARKEKDDSKPGKEPKPNQSFSIVDAASASVHGRSAAAAKATSAEKTAARIAMHMAGERAP
VNAKLVKSRYTTGAASRSFTSTSYDPVTKNEYEYVKVERNPKKKGYVQLHTTHGDLNLEL
HCDITPRTCENFLTHCENGYYDGLIFHRSIKNFMIQGGDPTGTGSGGESIWGKPFKDEPN
SKLLHSGRGVVSMANSGPHTNGSQFFILYKSAPHLNFKHTVFGMVVGGLTTLSAMEKVPV
DDDDRPLEEIKILKVSIFVNPYTEPDEEEEKAKEEEEKKKDEDYDKVGSWYSNPGTGVAG
STSTGGGVGKYLKARTAGSVDVTGSAGAADDSSKKRKATASSVEFKDFSGW
NT seq
1776 nt
NT seq
+upstream
nt +downstream
nt
atggggaagaagcagcacagcaaggaccgcatgttcatcacgcggacggagtgggcgact
gaatggggcggcgccaagcagaaggacgtcggcacgccgttcaagcgcctccccttctac
tgttgctcactcacatttcttccatttgaggatccagtgtgcaccgtagatggaagcgtc
ttcgatttaatgagcatagtcccataccttaaaaagtttgggaagcatccagtaaccgga
gcaccactcaagcacgaagatctgattcctctcacattccacaagaactcagatggagag
tttcagtgtcctgttctgaacaaagtttttacagaattcacacacatagttgctgtaaaa
actactggaaatgtcttctgttatgaggcaatccaagaacttaacatcaagccaaaaaat
tggaaagaattgctaaccgatgagcccttcactcgaaatgacttgataacgattcagaac
ccaaacgtggttgatggcaaggtccttggggaattcgatcatgtcaaaaagggcctcaaa
cttgaggatgaagagttgcagcggatgaaagatgatccaacctataacataaatatttct
ggtgatcttaagcaaatgattaaggatcttgggacagaaaagggaaaggaagcttttttg
caggggggtggagggctgaaagctcaaaaggaaagagctgcggctcttgctgcaatttta
gcaaggaaggagaaggatgactcaaaaccaggaaaagaacctaaacctaatcaaagtttc
agtattgtggatgctgcttctgcttctgttcatggcaggagtgcagcagcagcaaaagca
acttctgctgaaaaaaccgctgctagaatcgctatgcatatggcaggggaacgagctcct
gtaaatgctaaactggtcaaaagtcgttacactactggagcagcgtcacgttctttcaca
tcgacttcttatgatcctgttacaaaaaatgaatatgagtatgttaaagttgaaaggaat
ccaaaaaagaaaggctacgttcagctgcatacaacccatggtgatttgaatttagagctt
cattgtgatataactcctcggacttgtgaaaatttcctcacgcattgtgaaaatggttac
tacgatggtcttatcttccatcggagcatcaaaaacttcatgattcaaggcggtgatcca
actggcacaggaagtggaggagagtccatatggggtaaaccgttcaaggatgagccaaac
tcaaagctgctacattctggaagaggtgtagttagcatggcaaattcaggccctcatacc
aacggatcccaattttttatcctgtacaagtctgcaccgcacttaaatttcaagcacaca
gtatttggcatggtggtgggtggtttgaccacactttcagctatggaaaaggttcctgtc
gatgatgacgaccggccattggaggaaataaagatcctaaaagtcagcatattcgtgaat
ccttacacagagccagatgaggaagaagaaaaggcaaaggaggaggaggagaagaaaaag
gatgaggattatgataaggtgggatcatggtatagcaacccaggaacgggtgttgctggt
tcaacgagtactggtggtggggttggcaagtatttaaaagctcggactgctggctctgtt
gatgtgactggaagtgctggtgcagctgatgattcaagcaagaagagaaaagctactgca
tccagtgtagagttcaaagatttttctggatggtag
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