KEGG   Sorghum bicolor (sorghum): 8058721
Entry
8058721           CDS       T01086                                 
Name
(RefSeq) SWI/SNF complex subunit SWI3A
  KO
K11649  SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily C
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi03082  ATP-dependent chromatin remodeling
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09120 Genetic Information Processing
  09126 Chromosome
   03082 ATP-dependent chromatin remodeling
    8058721
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:sbi03021]
    8058721
   03036 Chromosome and associated proteins [BR:sbi03036]
    8058721
Transcription machinery [BR:sbi03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    BAF/PBAF complex
     8058721
Chromosome and associated proteins [BR:sbi03036]
 Eukaryotic type
  Chromatin remodeling factors
   BAF complex
    8058721
   PBAF complex
    8058721
   GBAF(ncBAF) complex
    8058721
SSDB
Motif
Pfam: SURF2 SWIRM Myb_DNA-binding SWIRM-assoc_1 Myb_DNA-bind_6
Other DBs
NCBI-GeneID: 8058721
NCBI-ProteinID: XP_021318974
LinkDB
Position
6:48786815..48794763
AA seq 719 aa
MSPPVAGAAATSGDGSPRELYTIPASSGWFRWDGIHETERQALPEFFGGAGGAGFGTATR
NPRIYREYRDFIIAKYREDPARRLTFTEVRRALVGDVTLLRKLFAFLDSSGLINFSASSS
SSGPASRKQEVGVVVEAPVGLQVTPRPPASYFAEEKRGAVGGEKENGFRLPPLTSYSDVF
GEWAPGKAPICGFCGEECNGAKVETLQDGFKVCSKCSKSNNDNNKEEANKCPGDKKESME
KSSGAWTDAETLLLLEGVLKHGDDWDLIAQHVRTKNKSECIARLIQLPFGEHMLGTINGK
SASRLHINQATDGKTNQHIMKEPSSHTTEMADGMQIDGNEDSADKSVEEYPTKRRRLFSS
MDATTSLMEQLALLTTTASPDVVAAAADAAIKAFSNENPQAKKAFRLSEREYKTKAFGSN
HVQQIDRKIGDKDVKMHGQPGSDKQEKKFIANAYQLRAAVATAVGVAAARAKMLADQEER
EMELLMASVIETQTGHELPEREKEAYARSRACRLALIDHAVARKKPPLNAFKPHPEHKSK
LVCKITGDTVNKLEDHIWKHINGKRFLNKLEKLEDQVASGEMADEEPVKSNEVAKKSKSR
KKDKKKANVASPSLPREPKPEMDDSDDPDFWVPPVGSRWDDDDGKDRWESSPGKPNSAKN
KGGSDDDGAGDNDGGGDDDTADKDDAESRELASRTKRMSIEAVGPSSFASRKKKPKKEQ
NT seq 2160 nt   +upstreamnt  +downstreamnt
atgtcgccgccggtggccggcgcggccgccacctccggcgacgggtcgccgcgcgagctc
tacaccatcccggcatcatccggttggttccggtgggacgggatccacgagacggagcgg
caggcactgccggagttcttcggcggggccggcggtgctgggttcgggacggcgacgagg
aacccgcgaatctaccgcgagtaccgcgacttcatcatcgccaagtaccgggaggacccg
gcgcgccgcctcactttcaccgaggtccgcagggcgcttgtcggggacgtcacgctcctc
aggaagctcttcgccttcctcgactcctccggcctcatcaacttctcggcctcctcctcg
tcctcgggccccgcgtcacggaagcaggaggtgggggtcgttgtggaggcgcccgtgggt
ctgcaggtgacgccgcggccgccagcgtcctactttgccgaggagaagcgtggggccgtg
ggcggggagaaggagaacggattccggttgccgccactgacctcctacagtgatgtgttt
ggggaatgggcacctgggaaggcgcctatatgtggtttttgcggtgaggagtgcaatggt
gcgaaagttgagacgctgcaggatggttttaaagtttgttcaaaatgttccaaaagcaat
aatgataataataaggaagaagcgaataaatgtccgggtgacaagaaggagagtatggaa
aaatcttccggtgcatggacagacgcggaaacattactccttttagaaggagtcctaaaa
catggagatgactgggatcttatcgcccagcatgtccgtacaaagaataaatcagaatgc
atagcaaggcttattcagttaccttttggcgaacatatgctgggcacaataaatggtaaa
tccgctagcaggctccacataaaccaggcaactgatggaaaaacaaaccagcacattatg
aaggagccttcaagccacacaactgaaatggctgacggcatgcagattgatggaaatgaa
gatagtgctgataaatcagttgaagaatatcctacaaaacgcagacggttattttcttcc
atggatgctaccacttcattaatggagcagttagcgctcctgaccacaacagctagccca
gatgttgttgctgcagctgctgatgctgcaattaaagcgttcagcaatgaaaacccacaa
gcaaagaaagcctttcgcctcagcgagcgagaatataagactaaggccttcggttctaat
catgtccaacagatcgaccgcaaaatcggcgataaggatgtgaaaatgcatggccagcct
ggttctgataagcaggaaaagaagttcattgctaatgcatatcaattgagggcagctgtt
gctactgctgttggtgtagctgctgcccgtgctaaaatgcttgcagaccaggaggagcga
gaaatggagctcctaatggcatctgtgattgaaactcagacagggcacgagctgccggag
cgggagaaggaggcgtacgcgcggtcccgcgcctgccgcctcgcgctcattgaccacgcc
gtcgcgcgcaagaagccgccgctcaacgccttcaagccccaccccgagcacaaatcgaag
ctggtatgcaagattacaggggatacggttaacaagttggaggatcacatatggaagcac
atcaacgggaagagatttcttaacaagctagaaaaactagaagaccaggtggcttctggc
gagatggctgatgaagaacctgtgaagtcaaatgaagtggcaaagaagagcaagtcaaga
aagaaggacaagaagaaagctaatgttgccagtccttctttgccaagagaacctaaacca
gagatggatgattcagatgatccagatttctgggtgcctccggttggaagtcgctgggat
gacgatgatgggaaagacagatgggagtcatcaccaggaaagcccaactcagcaaagaac
aaaggtggttctgatgatgatggtgctggtgataatgacggtggtggtgatgatgatacg
gctgacaaggatgatgctgaatcaagggaacttgcttcgaggacaaagcgaatgtcaata
gaggctgttgggccaagtagcttcgcttcaaggaagaaaaaacccaagaaggagcagtaa

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