KEGG   Sorghum bicolor (sorghum): 8067576
Entry
8067576           CDS       T01086                                 
Name
(RefSeq) clathrin heavy chain 1
  KO
K04646  clathrin heavy chain
Organism
sbi  Sorghum bicolor (sorghum)
Pathway
sbi04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:sbi00001]
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    8067576
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:sbi04131]
    8067576
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:sbi04147]
    8067576
Membrane trafficking [BR:sbi04131]
 Endocytosis
  Clathrin-mediated endocytosis
   Clathrin
    8067576
Exosome [BR:sbi04147]
 Exosomal proteins
  Proteins found in most exosomes
   8067576
SSDB
Motif
Pfam: Clathrin Clathrin_propel Clathrin_H_link Clathrin-link
Other DBs
NCBI-GeneID: 8067576
NCBI-ProteinID: XP_002448862
LinkDB
Position
5:274469..285770
AA seq 1709 aa
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDAAHFLDVIRAAEEANVYDDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELIALMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDMLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMLDFAFPYLLQFIREY
TSKVDDLVKDKIESQKEERAKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGPPPMGGM
GMPPMGGMGMPPMGPGPMPAFGMPPMGSY
NT seq 5130 nt   +upstreamnt  +downstreamnt
atggcggcggccaacgcccccatcgccatgcgcgaggcgctcacgctcaccagcctgggc
atcgcgccgcagttcgtcaccttcacccacgtcaccatggagtcggagaagtacatctgc
gtccgcgagacctccccgcagaacagcgtcgtcatcatcgacatggccatgcccatgcag
ccgctccgccgccccatcaccgccgactccgccctcatgaaccccaacaccaggatcctc
gccctcaaagcccaaatacctggaacaacacaggatcaccttcaaatatttaacattgag
gccaagactaagatcaagtctcatcagatgcccgagcaggttgtattctggaaatggatc
acacccaagttgttgggtttagtaacacagacatctgtttaccattggtcaattgaaggt
gattctgagcccaccaagatgtttgataggacagctaatttggcaaacaaccagattatc
aactacagatgtgacccagcggagaagtggcttgtgcttattggcattgcacctggtgcc
ccggagaggccacaactggtgaagggaaatatgcaacttttttctgtcgatcaacagcgt
agccaggcccttgaagcccatgcagcgtcttttgcaacatttaaggttgttggtaatgag
aacccatcaacccttatttgtttcgcctcaaagacaactaatgctggacagatcacttca
aaattgcatgttattgaactgggtgcacagccagggaaacctggcttttctaagaaacaa
gccgacctcttcttcccaccagatttccaggatgattttcctgtagctatgcaggtttca
caaaagtatgggcttatctatgtaattacaaagcttggccttttgtttgtatatgacttg
gaaactgctgcggcagtttacagaaatagaatcagtccagaccctatattcttgacggca
gaatcttcctctactggtggattttatgctatcaacagaagagggcaggttttacatgcc
acagttaatgacgcaactgttgtaccttttgtcagtggccaattaaacaaccttgagctt
gctgtgaatctggccaagagagctaaccttcctggtgctgagaacttggttgtgcaaaga
ttccaggaactgtttgcacagacaaaatacaaggaagcagctgagctggctgcggaatct
ccccagggtctcctgaggacgcctgagaccgtggcgaaatttcagagtgttcctgtgcaa
gctgggcaaacgcccccactcttgcagtactttggcacattgctaactcgagggaagctc
aatgcctttgagtctcttgagctatctcgacttgtcgtcaatcagaacaaaaagaatctt
ctggaaaattggttggcagaagacaagctagagtgtagtgaagaactaggagatcttgtc
aagactgtggacaatgatcttgcactgaaaatatacataaaggctagggcaacccctaaa
gttgttgctgcttttgctgaaaggagggagtttgacaagatactgatatactcaaagcag
gtcgggtacacgccagattatctcttcctcctccagaccatcttgcgtacagatccacag
ggagctgtgaactttgctctcatgatgtcacaaatggagggaggctgcccagtagattat
aatacaataactgatcttttccttcagaggaatatgatacgagaggcaacagcttttctg
ttggatgttctgaaaccaaacttgccagagcatgcttttcttcaaaccaaggttttggag
ataaacttagtgacttacccgaatgttgctgatgccattcttgctaatggtatgttcagt
cattacgaccgccctcgtattgctcagctgtgtgaaaaggctggtctgtacttgcgagct
ctccagcattactcagagttgcctgatatcaagcgtgtcattgtaaatacccatgccatt
gaaccacaggcacttgttgagttctttggtaccttgtcaagggagtgggctttggagtgc
atgaaagaccttctactggttaatctgaggggaaatcttcagattgttgtgcaggctgcg
aaagaatactctgagcagctaggggttgacgcttgcatcaaattatttgaacaattcaaa
tcttatgagggcctttactttttcttgggatcctatctgagctccagtgaggacccagat
atccatttcaagtacatagaagcagctgcaaggactggacagatcaaagaagttgaacgt
gtaactagagagtcaaacttctatgatgccgagaagacaaagaactttttgatggaagca
aaactacctgatgctcgtccactgattaatgtttgtgaccgctttggttttgtgccagat
ctcactcactatctgtacaccaacaacatgcttcgatatatcgaaggctatgttcagaag
gtgaatcctgggaatgctccattggtagtggggcaactacttgatgatgagtgccctgaa
gattttatcaagggtttgattctctctgttcgttctctccttcctgttgagcctctggtt
gatgaatgtgagaagaggaaccgcctacgtttgctcactcaattcttggagcacttagtg
agtgaaggtagccaagatgtgcatgtccataatgctcttgggaaaatcatcattgacagc
aacaacaatcctgagcatttccttactaccaacccattttacgattctcgtgttgtgggc
aaatattgtgaaaagcgggatcctacacttgccgttgttgcttacagacgtgggcagtgt
gatgatgaacttattaatgtcactaacaaaaactcattattcaagctgcaagctaggtat
gtggttgagagaatggatggtgatctgtgggataaagttcttcagcctgagaatgaatat
agaaggcaactcattgaccaagtggtttcgactgcattacctgagagcaagagccctgag
caagtgtctgctgctgttaaggctttcatgactgctgacctgccacatgaactgattgag
cttcttgaaaagattgttcttcagaattctgctttcagtggaaatttcaatctgcagaac
ctgctcatcttgactgctatcaaggcagatccatccagagtcatggactatgtcaacaga
ctcgataactttgatgggcctgctgttggagaagttgctgttgaagcacaactgtatgag
gaggcttttgctatattcaagaagttcaacttaaatgtgcaggctgtcaatgttctcttg
gacaacatccggagcatagaaagagccgaggaatttgcttttcgtgttgaagaagatgct
gtttggagccaggttgccaaagcccagttacgtgaaggtctggtcagtgaagcaattgag
tccttcattcgcgcagatgatgctgcacacttccttgatgtcatccgtgctgctgaagaa
gctaatgtgtacgatgatttagtgaagtaccttctgatggtaaggcaaaaagcacgggaa
cccaaagtcgatggagaactcatctttgcatatgctaagattgacaggctcagtgacatt
gaggagttcattcttatgccaaatgttgccaaccttcaaaatgtcggtgaccgtctgtat
gatgaagaactatatgaagctgcaaagatcatctatgctttcatctcgaactgggctaag
ctggctgttaccctggttaagctgaagcagttccaaggtgctgtggatgctgctcgcaag
gctaacagtgccaaaacatggaaggaggtctgctttgcttgtgttgacgctgaggagttc
cgtcttgcacaaatatgtggtctcaatattattgttcaggttgatgacttggaagaagtc
agtgaatactaccagaatagaggatgcttcaatgaacttattgctctcatggagagtggt
cttggacttgaacgtgcacacatgggcatcttcacagaattgggagttctatatgctaga
taccgccctgagaagcttatggagcacatcaaacttttctccacccgtcttaatattcct
aagcttattcgagcttgtgatgaacagcagcactggaaagaacttacctacctgtacata
cagtatgatgaatttgacaatgctgccaccaccattatgaaccactctccagatgcatgg
gatcatatgcagttcaaggatgtttgcgttaaagttgcaaatgttgagctatattacaag
gcagttcacttctatttgcaagagcatcctgatctcattaatgatatgctaaatgtgctt
gcacttcggttagatcataccagagttgtagacataatgcgcaaggctggccaattgcat
cttgtgaaaccatatatggttgcagttcagagtaacaatgtctctgctgtgaatgaagcc
ttgaatgagctttacgttgaagaggaggactatgagagactccgggaatcagttgatatg
cacgacaactttgaccagataggtcttgcccagaagcttgagaagcatgaattgcttgaa
atgaggaggattgctgcctacatttacaagaaggctggcaggtggaagcaatccattgct
ctatcaaagaaagacaacatgtacaaggattgcatggagacatgctcacaatctggcgac
cgtgaactgtcagaggacttgcttgtctatttcattgagcagggtaagaaagaatgcttt
gcatcctgcctcttcatttgctacgacttgatccggccagatgtcgctcttgagcttgca
tggatgaacaacatgttggactttgccttcccatacctgttgcagttcatccgtgagtac
actagcaaggtggatgatttagtgaaggacaaaattgagtcgcagaaggaagaaagagcc
aaagagaaggaggagaaagatcttgtggctcagcagaacatgtatgcccaactgcttcct
cttgctttgcctgctccgccaatgcctggcatgggtggtccacctccgatgggtgggatg
ggcatgcctccaatgggtggaatgggtatgccgccgatgggccctggtccgatgccagca
ttcgggatgccaccaatgggaagctactga

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