Sorghum bicolor (sorghum): 8067576
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Entry
8067576 CDS
T01086
Name
(RefSeq) clathrin heavy chain 1
KO
K04646
clathrin heavy chain
Organism
sbi
Sorghum bicolor (sorghum)
Pathway
sbi04144
Endocytosis
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
8067576
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
sbi04131
]
8067576
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
sbi04147
]
8067576
Membrane trafficking [BR:
sbi04131
]
Endocytosis
Clathrin-mediated endocytosis
Clathrin
8067576
Exosome [BR:
sbi04147
]
Exosomal proteins
Proteins found in most exosomes
8067576
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Clathrin
Clathrin_propel
Clathrin_H_link
Clathrin-link
Motif
Other DBs
NCBI-GeneID:
8067576
NCBI-ProteinID:
XP_002448862
LinkDB
All DBs
Position
5:274469..285770
Genome browser
AA seq
1709 aa
AA seq
DB search
MAAANAPIAMREALTLTSLGIAPQFVTFTHVTMESEKYICVRETSPQNSVVIIDMAMPMQ
PLRRPITADSALMNPNTRILALKAQIPGTTQDHLQIFNIEAKTKIKSHQMPEQVVFWKWI
TPKLLGLVTQTSVYHWSIEGDSEPTKMFDRTANLANNQIINYRCDPAEKWLVLIGIAPGA
PERPQLVKGNMQLFSVDQQRSQALEAHAASFATFKVVGNENPSTLICFASKTTNAGQITS
KLHVIELGAQPGKPGFSKKQADLFFPPDFQDDFPVAMQVSQKYGLIYVITKLGLLFVYDL
ETAAAVYRNRISPDPIFLTAESSSTGGFYAINRRGQVLHATVNDATVVPFVSGQLNNLEL
AVNLAKRANLPGAENLVVQRFQELFAQTKYKEAAELAAESPQGLLRTPETVAKFQSVPVQ
AGQTPPLLQYFGTLLTRGKLNAFESLELSRLVVNQNKKNLLENWLAEDKLECSEELGDLV
KTVDNDLALKIYIKARATPKVVAAFAERREFDKILIYSKQVGYTPDYLFLLQTILRTDPQ
GAVNFALMMSQMEGGCPVDYNTITDLFLQRNMIREATAFLLDVLKPNLPEHAFLQTKVLE
INLVTYPNVADAILANGMFSHYDRPRIAQLCEKAGLYLRALQHYSELPDIKRVIVNTHAI
EPQALVEFFGTLSREWALECMKDLLLVNLRGNLQIVVQAAKEYSEQLGVDACIKLFEQFK
SYEGLYFFLGSYLSSSEDPDIHFKYIEAAARTGQIKEVERVTRESNFYDAEKTKNFLMEA
KLPDARPLINVCDRFGFVPDLTHYLYTNNMLRYIEGYVQKVNPGNAPLVVGQLLDDECPE
DFIKGLILSVRSLLPVEPLVDECEKRNRLRLLTQFLEHLVSEGSQDVHVHNALGKIIIDS
NNNPEHFLTTNPFYDSRVVGKYCEKRDPTLAVVAYRRGQCDDELINVTNKNSLFKLQARY
VVERMDGDLWDKVLQPENEYRRQLIDQVVSTALPESKSPEQVSAAVKAFMTADLPHELIE
LLEKIVLQNSAFSGNFNLQNLLILTAIKADPSRVMDYVNRLDNFDGPAVGEVAVEAQLYE
EAFAIFKKFNLNVQAVNVLLDNIRSIERAEEFAFRVEEDAVWSQVAKAQLREGLVSEAIE
SFIRADDAAHFLDVIRAAEEANVYDDLVKYLLMVRQKAREPKVDGELIFAYAKIDRLSDI
EEFILMPNVANLQNVGDRLYDEELYEAAKIIYAFISNWAKLAVTLVKLKQFQGAVDAARK
ANSAKTWKEVCFACVDAEEFRLAQICGLNIIVQVDDLEEVSEYYQNRGCFNELIALMESG
LGLERAHMGIFTELGVLYARYRPEKLMEHIKLFSTRLNIPKLIRACDEQQHWKELTYLYI
QYDEFDNAATTIMNHSPDAWDHMQFKDVCVKVANVELYYKAVHFYLQEHPDLINDMLNVL
ALRLDHTRVVDIMRKAGQLHLVKPYMVAVQSNNVSAVNEALNELYVEEEDYERLRESVDM
HDNFDQIGLAQKLEKHELLEMRRIAAYIYKKAGRWKQSIALSKKDNMYKDCMETCSQSGD
RELSEDLLVYFIEQGKKECFASCLFICYDLIRPDVALELAWMNNMLDFAFPYLLQFIREY
TSKVDDLVKDKIESQKEERAKEKEEKDLVAQQNMYAQLLPLALPAPPMPGMGGPPPMGGM
GMPPMGGMGMPPMGPGPMPAFGMPPMGSY
NT seq
5130 nt
NT seq
+upstream
nt +downstream
nt
atggcggcggccaacgcccccatcgccatgcgcgaggcgctcacgctcaccagcctgggc
atcgcgccgcagttcgtcaccttcacccacgtcaccatggagtcggagaagtacatctgc
gtccgcgagacctccccgcagaacagcgtcgtcatcatcgacatggccatgcccatgcag
ccgctccgccgccccatcaccgccgactccgccctcatgaaccccaacaccaggatcctc
gccctcaaagcccaaatacctggaacaacacaggatcaccttcaaatatttaacattgag
gccaagactaagatcaagtctcatcagatgcccgagcaggttgtattctggaaatggatc
acacccaagttgttgggtttagtaacacagacatctgtttaccattggtcaattgaaggt
gattctgagcccaccaagatgtttgataggacagctaatttggcaaacaaccagattatc
aactacagatgtgacccagcggagaagtggcttgtgcttattggcattgcacctggtgcc
ccggagaggccacaactggtgaagggaaatatgcaacttttttctgtcgatcaacagcgt
agccaggcccttgaagcccatgcagcgtcttttgcaacatttaaggttgttggtaatgag
aacccatcaacccttatttgtttcgcctcaaagacaactaatgctggacagatcacttca
aaattgcatgttattgaactgggtgcacagccagggaaacctggcttttctaagaaacaa
gccgacctcttcttcccaccagatttccaggatgattttcctgtagctatgcaggtttca
caaaagtatgggcttatctatgtaattacaaagcttggccttttgtttgtatatgacttg
gaaactgctgcggcagtttacagaaatagaatcagtccagaccctatattcttgacggca
gaatcttcctctactggtggattttatgctatcaacagaagagggcaggttttacatgcc
acagttaatgacgcaactgttgtaccttttgtcagtggccaattaaacaaccttgagctt
gctgtgaatctggccaagagagctaaccttcctggtgctgagaacttggttgtgcaaaga
ttccaggaactgtttgcacagacaaaatacaaggaagcagctgagctggctgcggaatct
ccccagggtctcctgaggacgcctgagaccgtggcgaaatttcagagtgttcctgtgcaa
gctgggcaaacgcccccactcttgcagtactttggcacattgctaactcgagggaagctc
aatgcctttgagtctcttgagctatctcgacttgtcgtcaatcagaacaaaaagaatctt
ctggaaaattggttggcagaagacaagctagagtgtagtgaagaactaggagatcttgtc
aagactgtggacaatgatcttgcactgaaaatatacataaaggctagggcaacccctaaa
gttgttgctgcttttgctgaaaggagggagtttgacaagatactgatatactcaaagcag
gtcgggtacacgccagattatctcttcctcctccagaccatcttgcgtacagatccacag
ggagctgtgaactttgctctcatgatgtcacaaatggagggaggctgcccagtagattat
aatacaataactgatcttttccttcagaggaatatgatacgagaggcaacagcttttctg
ttggatgttctgaaaccaaacttgccagagcatgcttttcttcaaaccaaggttttggag
ataaacttagtgacttacccgaatgttgctgatgccattcttgctaatggtatgttcagt
cattacgaccgccctcgtattgctcagctgtgtgaaaaggctggtctgtacttgcgagct
ctccagcattactcagagttgcctgatatcaagcgtgtcattgtaaatacccatgccatt
gaaccacaggcacttgttgagttctttggtaccttgtcaagggagtgggctttggagtgc
atgaaagaccttctactggttaatctgaggggaaatcttcagattgttgtgcaggctgcg
aaagaatactctgagcagctaggggttgacgcttgcatcaaattatttgaacaattcaaa
tcttatgagggcctttactttttcttgggatcctatctgagctccagtgaggacccagat
atccatttcaagtacatagaagcagctgcaaggactggacagatcaaagaagttgaacgt
gtaactagagagtcaaacttctatgatgccgagaagacaaagaactttttgatggaagca
aaactacctgatgctcgtccactgattaatgtttgtgaccgctttggttttgtgccagat
ctcactcactatctgtacaccaacaacatgcttcgatatatcgaaggctatgttcagaag
gtgaatcctgggaatgctccattggtagtggggcaactacttgatgatgagtgccctgaa
gattttatcaagggtttgattctctctgttcgttctctccttcctgttgagcctctggtt
gatgaatgtgagaagaggaaccgcctacgtttgctcactcaattcttggagcacttagtg
agtgaaggtagccaagatgtgcatgtccataatgctcttgggaaaatcatcattgacagc
aacaacaatcctgagcatttccttactaccaacccattttacgattctcgtgttgtgggc
aaatattgtgaaaagcgggatcctacacttgccgttgttgcttacagacgtgggcagtgt
gatgatgaacttattaatgtcactaacaaaaactcattattcaagctgcaagctaggtat
gtggttgagagaatggatggtgatctgtgggataaagttcttcagcctgagaatgaatat
agaaggcaactcattgaccaagtggtttcgactgcattacctgagagcaagagccctgag
caagtgtctgctgctgttaaggctttcatgactgctgacctgccacatgaactgattgag
cttcttgaaaagattgttcttcagaattctgctttcagtggaaatttcaatctgcagaac
ctgctcatcttgactgctatcaaggcagatccatccagagtcatggactatgtcaacaga
ctcgataactttgatgggcctgctgttggagaagttgctgttgaagcacaactgtatgag
gaggcttttgctatattcaagaagttcaacttaaatgtgcaggctgtcaatgttctcttg
gacaacatccggagcatagaaagagccgaggaatttgcttttcgtgttgaagaagatgct
gtttggagccaggttgccaaagcccagttacgtgaaggtctggtcagtgaagcaattgag
tccttcattcgcgcagatgatgctgcacacttccttgatgtcatccgtgctgctgaagaa
gctaatgtgtacgatgatttagtgaagtaccttctgatggtaaggcaaaaagcacgggaa
cccaaagtcgatggagaactcatctttgcatatgctaagattgacaggctcagtgacatt
gaggagttcattcttatgccaaatgttgccaaccttcaaaatgtcggtgaccgtctgtat
gatgaagaactatatgaagctgcaaagatcatctatgctttcatctcgaactgggctaag
ctggctgttaccctggttaagctgaagcagttccaaggtgctgtggatgctgctcgcaag
gctaacagtgccaaaacatggaaggaggtctgctttgcttgtgttgacgctgaggagttc
cgtcttgcacaaatatgtggtctcaatattattgttcaggttgatgacttggaagaagtc
agtgaatactaccagaatagaggatgcttcaatgaacttattgctctcatggagagtggt
cttggacttgaacgtgcacacatgggcatcttcacagaattgggagttctatatgctaga
taccgccctgagaagcttatggagcacatcaaacttttctccacccgtcttaatattcct
aagcttattcgagcttgtgatgaacagcagcactggaaagaacttacctacctgtacata
cagtatgatgaatttgacaatgctgccaccaccattatgaaccactctccagatgcatgg
gatcatatgcagttcaaggatgtttgcgttaaagttgcaaatgttgagctatattacaag
gcagttcacttctatttgcaagagcatcctgatctcattaatgatatgctaaatgtgctt
gcacttcggttagatcataccagagttgtagacataatgcgcaaggctggccaattgcat
cttgtgaaaccatatatggttgcagttcagagtaacaatgtctctgctgtgaatgaagcc
ttgaatgagctttacgttgaagaggaggactatgagagactccgggaatcagttgatatg
cacgacaactttgaccagataggtcttgcccagaagcttgagaagcatgaattgcttgaa
atgaggaggattgctgcctacatttacaagaaggctggcaggtggaagcaatccattgct
ctatcaaagaaagacaacatgtacaaggattgcatggagacatgctcacaatctggcgac
cgtgaactgtcagaggacttgcttgtctatttcattgagcagggtaagaaagaatgcttt
gcatcctgcctcttcatttgctacgacttgatccggccagatgtcgctcttgagcttgca
tggatgaacaacatgttggactttgccttcccatacctgttgcagttcatccgtgagtac
actagcaaggtggatgatttagtgaaggacaaaattgagtcgcagaaggaagaaagagcc
aaagagaaggaggagaaagatcttgtggctcagcagaacatgtatgcccaactgcttcct
cttgctttgcctgctccgccaatgcctggcatgggtggtccacctccgatgggtgggatg
ggcatgcctccaatgggtggaatgggtatgccgccgatgggccctggtccgatgccagca
ttcgggatgccaccaatgggaagctactga
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integrated database retrieval system