Sorghum bicolor (sorghum): 8075216
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Entry
8075216 CDS
T01086
Name
(RefSeq) homeobox-leucine zipper protein ROC8
KO
K09338
homeobox-leucine zipper protein
Organism
sbi
Sorghum bicolor (sorghum)
Brite
KEGG Orthology (KO) [BR:
sbi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
sbi03000
]
8075216
Transcription factors [BR:
sbi03000
]
Eukaryotic type
Helix-turn-helix
Homeo domain other
8075216
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
START
Homeodomain
Homeobox_KN
Motif
Other DBs
NCBI-GeneID:
8075216
NCBI-ProteinID:
XP_002452898
UniProt:
C5XTH9
LinkDB
All DBs
Position
4:65043113..65048150
Genome browser
AA seq
707 aa
AA seq
DB search
MDFGDDVMDGGSDAQRRKKRYHRHTPRQIQQLEAMFKECPHPDENQRMQLSRELGLEPRQ
IKFWFQNRRTQMKAQHERQDNCFLRAENDKIRCENIAMREALRTVICHTCGGPPVTDDYF
DEQKLRMENARLKEELDRVSSLTSKYLGRPITQLPPVQPLSMSSSLDLSVGGLGSPALGP
SLDLDLLSGGSSGYPPFHLPMTVSEMERPMMAEMATRAMDELIRMAQAGEHLWVKTAGGG
PDGREVLNVDTYDSIFAKPGGSFRGPDVHVEGSRDSGLVFMSAIGLVDMFMDSSKFTEFF
PAIVSKARTMDVLVNGMAGRSDSLVLMYEELHMMSPVVPTREFCFLRYCRQIEHGLWAIA
DISVDLQQRDARFGAPPSRSCRLPSGCLIADMADGSSKVTWVEHMEIEDRVPIHLLYRDL
ILSGAAFGAHRWLAALQRACERCACLATAGMPHRDIAAAGVTPEGKRSMMKLSQRMVSSF
CASLSASQLHRWTTLSGPNDVGVRVMVHRSTDPGQPSGVVLSAATSIWLPVPCDRVFAFV
RDEHTRSQWDVLSHGNPVQEVSRIPNGSHPGNCISLLRGLNASQNSMLILQESCTDASGS
LVVYAPIDIPAANVVMSGEDPSAIPLLPSGFTILPDGRPGASSSSSSAAGGTLGATAAAG
SLVTVAFQILVSSLPSSKLNAESVATVNSLISTTVEQIKAALNCASH
NT seq
2124 nt
NT seq
+upstream
nt +downstream
nt
atggacttcggcgacgacgtcatggacggcggctccgacgcccagcgtcgcaagaagaga
taccaccgccacaccccgcgccagattcagcagctcgaggcgatgttcaaggagtgcccg
cacccggacgagaaccagcggatgcagctgagcagggagctggggctggagccccggcag
atcaagttctggttccagaaccgccggacgcagatgaaggcacagcacgagcggcaggac
aactgcttcctgcgcgcggagaacgacaagatccggtgcgagaacatcgccatgcgggag
gccctccgcaccgtcatctgccacacctgcggcggtccgcccgtcaccgacgactacttc
gacgagcagaagctgcgcatggagaacgcgcggctcaaggaagagcttgaccgggtgtcc
agcctgacgtccaagtacctggggcggcccatcacgcagctgccgccggtgcagccgctg
tccatgtcctcgtcgctggacctgtccgtcggcgggctcggcagcccggcgctgggcccg
tcgctggacctcgacctcctcagcggcggctcctccgggtaccctccgttccacctcccg
atgacggtgtcggagatggagcggcccatgatggccgagatggcgacgcgcgccatggac
gagctcatcaggatggcgcaggccggcgagcacctgtgggtcaagacggcgggcggcggc
cctgacggtcgcgaggtgctcaacgtcgacacgtacgacagcatcttcgccaagcccggg
ggctcgttccgcggccccgacgtgcacgtcgagggctcccgcgactcgggcctcgtcttc
atgagcgccatcggcctcgtcgacatgttcatggactcgagcaagtttacggagttcttc
cctgccatcgtgtccaaggcgcgcacgatggacgtcctcgtgaacggcatggccgggcgg
agcgactctttggttctgatgtacgaggagctgcacatgatgtcgccggtcgtcccgacg
cgcgagttctgcttcctccgctactgccggcagatagagcacgggctatgggcgatcgcg
gacatctcggtagacctgcagcagcgcgacgcaaggttcggtgcgccgccatcgcgctcg
tgccgcctcccgtcgggatgcctcattgctgatatggccgatggctcctccaaggtgacc
tgggtcgagcacatggagatcgaggacagggttcccatccacctgctgtaccgcgacctc
atcctcagcggcgccgcgttcggggcgcaccggtggctcgccgcgctgcagagggcgtgc
gagcggtgcgcgtgcctagccacggccggcatgccgcaccgggacattgcagctgcagga
gtgacgccggaagggaagcggagcatgatgaagctgtcgcagcggatggtgagcagcttc
tgcgcgagcctgagcgcgtcgcagctccaccggtggacgacgctgtcggggcccaacgat
gtgggcgtccgcgtcatggtgcaccgcagcacggacccggggcagcccagcggcgtggtg
ctcagcgctgccacgtccatctggctgccggtcccgtgcgaccgggtgttcgccttcgtc
cgcgacgagcacacgcgctcccagtgggacgtgctgtcgcacggcaacccggtgcaggag
gtgtcgcgcatccccaacggctcccaccctggaaactgtatctccttgctcagaggcctg
aacgcgagccagaacagcatgctgatcctgcaggagagctgcaccgacgcgtcgggctcg
ctggtggtgtacgcgccgatcgacatcccggcggcgaacgtggtgatgagcggcgaggac
ccgtcggcgatcccgctcctgccgtccggcttcaccatcctgcccgacgggcggcccggc
gcatcgtcgtcgtcgtcgagcgctgccggtggcacgctgggcgcgacggcggcggccggg
tcgctggtgacggtggcgttccagatcctggtgagcagcctgccgtcgtcgaagctgaac
gccgagtcggtggcgacggtcaacagcctcatcagcaccactgtggagcaaattaaggcg
gccttgaattgcgccagccattga
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