Shewanella bicestrii: CF168_00055
Help
Entry
CF168_00055 CDS
T05197
Name
(GenBank) DNA polymerase III subunit beta
KO
K02338
DNA polymerase III subunit beta [EC:
2.7.7.7
]
Organism
sbj
Shewanella bicestrii
Pathway
sbj03030
DNA replication
sbj03430
Mismatch repair
sbj03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sbj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
CF168_00055
03430 Mismatch repair
CF168_00055
03440 Homologous recombination
CF168_00055
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
sbj03032
]
CF168_00055
03400 DNA repair and recombination proteins [BR:
sbj03400
]
CF168_00055
Enzymes [BR:
sbj01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
CF168_00055
DNA replication proteins [BR:
sbj03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
CF168_00055
DNA repair and recombination proteins [BR:
sbj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
CF168_00055
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_beta
DNA_pol3_beta_3
DNA_pol3_beta_2
PglD_N
Motif
Other DBs
NCBI-ProteinID:
ASK67372
UniProt:
A0A220UHJ7
LinkDB
All DBs
Position
8986..10086
Genome browser
AA seq
366 aa
AA seq
DB search
MKFSIDRDALLKPLQLVCGAVERRHNLPILANLLVEVSGHSLKMTGTDLEVELVGQAVIH
GDIEEGRTTVPAKKLLDIVKSLPEQSELKVEQQDNKWLLRSGRSRFSLATLPAEEYPNVE
AFQAEIEFTLKQGVLKSLIDATQFSMANQDVRYYLNGLLLETEGNVLRAIATDGHRLALS
HRTIDAQLPEKQVIVPRKGVMEMARLLEADDLDIAIAIGDNAIRATTSTTVFTSKLVDGR
FPDYRRVLPKGGDKIVIASRNHFKQALTRASILSNEKFRGVRIQLEAGLLKITANNPEQE
EAEEIIDVDYNNQPLEIGFNVSYLLDVLNNLKSDDVRITLIDGNSSALLENHLEEDSMYV
VMPMRL
NT seq
1101 nt
NT seq
+upstream
nt +downstream
nt
atgaaattttcaattgatagggacgccctattaaagccgcttcaattggtttgtggtgcg
gtagaaagacgccataacttgcctattttggcaaatctccttgtagaagttagtgggcac
tcactcaaaatgacaggtaccgacctcgaagttgagttagtgggccaggcggtcattcat
ggtgatatcgaagaaggtcgtacaacagttcctgctaagaaactgttagatatagttaaa
tccttacccgagcaaagtgagcttaaggtcgagcaacaagataacaaatggttgttacgc
tctggccgtagccgtttctcgctggcaaccctgcccgcagaagaataccccaacgtggaa
gcctttcaggcggaaatcgaatttacccttaagcaaggcgtgctgaagtcactgattgat
gcgactcagttttcgatggcgaaccaagatgttcgttactatctgaatggtttattgctc
gaaaccgaaggcaatgtgctgcgcgctattgctaccgacggtcaccgcttagccttaagt
cacagaactattgatgcgcaattacctgaaaagcaagtgattgtgccccgtaaaggtgtg
atggaaatggcgcgtttgttggaagccgatgatttagatatcgcaattgccattggtgat
aacgcgattcgcgcgaccaccagcaccactgtctttaccagcaaattagtcgatggtcgt
ttccccgattatcgccgtgtgttacctaagggcggtgataaaatcgttatcgccagccgt
aaccacttcaagcaagccttaacccgtgcttctattttatcgaacgagaagtttcgcggt
gtacgcattcagttagaagcgggattactgaaaatcaccgccaataacccagagcaggaa
gaagcggaagaaatcatcgatgtggattacaacaatcagccactcgaaattggtttcaac
gtcagttacttattggatgtgttaaacaaccttaagtccgatgatgtgcgtatcacctta
atcgatggtaactcgagtgccttattggaaaaccacctggaagaagattccatgtatgtg
gttatgccgatgcgcttatag
DBGET
integrated database retrieval system