Shewanella benthica: SHEWBE_1833
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Entry
SHEWBE_1833 CDS
T06707
Symbol
xseB
Name
(GenBank) exonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
sbk
Shewanella benthica
Pathway
sbk03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
SHEWBE_1833 (xseB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sbk03400
]
SHEWBE_1833 (xseB)
Enzymes [BR:
sbk01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
SHEWBE_1833 (xseB)
DNA repair and recombination proteins [BR:
sbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
SHEWBE_1833 (xseB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
KxDL
TACC_C
Motif
Other DBs
NCBI-ProteinID:
SQH75799
UniProt:
A0A330LZI3
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All DBs
Position
SHEWBE:complement(1701606..1701845)
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AA seq
79 aa
AA seq
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MAKKPENLTFEDSLTELEHIVSALEQGDVSLDDALKQFERGIKLVRNSQGKLEQAQQKVS
ILMQEDENASLTPFDAEGE
NT seq
240 nt
NT seq
+upstream
nt +downstream
nt
gtggcaaaaaaacctgaaaacctcacatttgaagactctctcaccgaactcgaacacata
gtttcagctcttgaacaaggggatgtgtcactcgacgatgccctaaaacagtttgaaaga
ggcataaaactggtgcgcaacagtcagggaaagctggaacaagcccagcaaaaagtctct
atattgatgcaagaagatgaaaatgcctcgctgaccccttttgatgctgaaggagaataa
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